Bioconductor Basemean

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votes

131

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DESeq2 diferentialabundance 16srRNA baseMean

updated 7 weeks ago by Michael Love 40k • written 7 weeks ago by PhD_student_microbiome • 0

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2.0k

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basemean DESeq2

updated 8 months ago by ATpoint ★ 2.9k • written 13 months ago by msellabenton • 0

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5.4k

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deseq2 baseMean differential gene expression rnaseqgene

updated 4.3 years ago by swbarnes2 ★ 1.2k • written 4.3 years ago by melkile26 • 0

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1.4k

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deseq2 diffbind basemean summarizedexperiment

4.8 years ago rbronste ▴ 60

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674

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deseq results baseMean

updated 4.9 years ago by Michael Love 40k • written 4.9 years ago by batmaiden • 0

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858

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deseq2 baseMean cooks distance

updated 5.3 years ago by Michael Love 40k • written 5.3 years ago by da.de ▴ 20

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Comment: Handling NA's in Deseq2 by Asger Mølgaard • 0

Dear ATpoint Thank you for your response - it works like a charm! You just saved a PhD-study! Thank you :)

Comment: Ensembl plants at annotationHub? by Bruno • 0

Hi Guido, Thanks for your fast reply the error was as said in my question "Annotation must be a GRanges object", when I tried to use the a…

Comment: Ensembl plants at annotationHub? by Guido Hooiveld ★ 3.6k

You did not show the code that resulted in that error, so we have to guess what you did. Yet, the [R package][1] `Signac` contains the func…

Comment: Query regarding phyloseq object construct with QIIME output by betterwound • 0

Thanks for sharing the code [geometry dash](https://geometrydash.io/)

Answer: Ensembl plants at annotationHub? by Bruno • 0

Hi Johannes, First, thank you so much for providing these annotations for the community. We feel often a bit left off in the plant commu…

Votes

C: Minimum number of samples per treatment/group for WGCNA analysis

A: Minimum number of samples per treatment/group for WGCNA analysis

Minimum number of samples per treatment/group for WGCNA analysis

Comment: DESeq2 on multilevel design variable

Comment: Ensembl plants at annotationHub?

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