Biostar Basic4cseq

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GenomicInteractions Basic4Cseq DNASeq GenomicFiles

19 months ago koushik • 0

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Basic4Cseq

updated 19 months ago by koushik • 0 • written 3.9 years ago by ta_awwad ▴ 10

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Basic4Cseq basic4cseq degenerate sites

6.6 years ago theodore.georgomanolis • 0

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Basic4Cseq

updated 7.1 years ago by Carolin Walter ▴ 10 • written 7.1 years ago by sinhashruti • 0

4 results • Page 1 of 1

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Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R by Gordon Smyth 47k

Choosing which samples to normalize together is not dependent on library size but rather on (1) whether the tissue samples are comparable a…

Comment: Atena package - error (new user) by lalanis1 • 0

Thanks a lot, Calvo. Will run my files with revised version soon! Best regards, Lalani

Comment: Nested paired design with covariates in limma by Gordon Smyth 47k

Please post a new question with enough detail to answer your question. If you want bespoke advance, then you need to post the details of yo…

Comment: Question about GWASTools gdsSubset by Stephanie M. Gogarten ▴ 840

You could see if an attribute has been set on the genotype node indicating the order: ``` > library(gdsfmt) > gdsfile <- system.file("extda…

Comment: Nested paired design with covariates in limma by Nathan • 0

Hello Ibrahim, Gordon (this is an extension of the question) I have a data set that is similarly nested in subject (like "Subject_ID" abov…

Votes

Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R

C: Can't install TopmedPipeline Package

Comment: Question about GWASTools gdsSubset

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Answer: Question about GWASTools gdsSubset

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