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basic4cseq
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Error in fragEnds[, 1] : incorrect number of dimensions while using printWigFile function in Basic4Cseq package
GenomicInteractions
Basic4Cseq
DNASeq
GenomicFiles
19 months ago
koushik
• 0
1
vote
6
replies
769
views
Basic4Cseq wiggle function
Basic4Cseq
updated 19 months ago by
koushik
• 0 • written 3.9 years ago by
ta_awwad
▴ 10
0
votes
2
replies
632
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Basic4Cseq, degenerate sites
Basic4Cseq
basic4cseq
degenerate sites
6.6 years ago
theodore.georgomanolis
• 0
0
votes
5
replies
1.2k
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error while running Basic4CSeq
Basic4Cseq
updated 7.1 years ago by
Carolin Walter
▴ 10 • written 7.1 years ago by
sinhashruti
• 0
4 results • Page
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Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R
by
Gordon Smyth
47k
Choosing which samples to normalize together is not dependent on library size but rather on (1) whether the tissue samples are comparable a…
Comment: Atena package - error (new user)
by
lalanis1
• 0
Thanks a lot, Calvo. Will run my files with revised version soon! Best regards, Lalani
Comment: Nested paired design with covariates in limma
by
Gordon Smyth
47k
Please post a new question with enough detail to answer your question. If you want bespoke advance, then you need to post the details of yo…
Comment: Question about GWASTools gdsSubset
by
Stephanie M. Gogarten
▴ 840
You could see if an attribute has been set on the genotype node indicating the order: ``` > library(gdsfmt) > gdsfile <- system.file("extda…
Comment: Nested paired design with covariates in limma
by
Nathan
• 0
Hello Ibrahim, Gordon (this is an extension of the question) I have a data set that is similarly nested in subject (like "Subject_ID" abov…
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Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R
C: Can't install TopmedPipeline Package
Comment: Question about GWASTools gdsSubset
Comment: How to normalize long-read RNA-seq data for comparison with short-reads
Answer: Question about GWASTools gdsSubset
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