Bioconductor GenomicInteractions

Showing : GenomicInteractions • reset

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227

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InteractionSet subsetByOverlaps GenomicInteractions

5 months ago LaureTomas • 0

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508

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GenomicInteractions Basic4Cseq DNASeq GenomicFiles

2.4 years ago koushik • 0

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1.4k

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diffHic GenomicInteractions edgeR HiC cooler

updated 3.3 years ago by Aaron Lun ★ 28k • written 3.3 years ago by Marco Blanchette ▴ 30

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878

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duplicate GenomicInteractions

3.6 years ago dogancan • 0

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688

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GenomicInteractions

3.7 years ago chang.jiaming • 0

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920

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GenomicInteractions gviz

updated 3.8 years ago by liz.ingsimmons ▴ 140 • written 3.8 years ago by Marco Blanchette ▴ 30

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675

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genomicInteractions annotation

updated 4.5 years ago by liz.ingsimmons ▴ 140 • written 4.5 years ago by ls760 • 0

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1.2k

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GenomicInteractions Gviz

updated 4.6 years ago by liz.ingsimmons ▴ 140 • written 4.6 years ago by Nik dAK ▴ 10

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genomicinteractions gviz interactionset

updated 5.0 years ago by liz.ingsimmons ▴ 140 • written 5.0 years ago by ferbecneu • 0

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1.2k

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genomicinteractions

6.2 years ago sarvesh.nikumbh ▴ 10

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2.3k

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gviz genomicinteractions

7.7 years ago enricoferrero ▴ 660

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1.0k

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genomicinteractions GRanges

updated 7.8 years ago by liz.ingsimmons ▴ 140 • written 7.8 years ago by tangming2005 ▴ 190

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1.9k

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GenomicInteractions

updated 7.9 years ago by Malcolm Perry ▴ 40 • written 7.9 years ago by tangming2005 ▴ 190

13 results • Page 1 of 1

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Comment: Normalised counts from RUVg in RUVSeq by Shaimaa Gamal • 0

Hello I was wondering if I should use ruv-corrected counts and ruv lib sizes to create a DGE object that can be used later for DE analysis …

Comment: enrichGOgradient color change by James W. MacDonald 64k

You could look at my answer and extrapolate from there.

Comment: enrichGOgradient color change by WU • 0

I would like to ask how to make the counts legend black. Thank you.

Answer: Problems with FLOWAI by Alexander • 0

Hi. The length of the file path, or whether the files are local on the computer has nothing to do with it in my experience. I watched the a…

Answer: Asses fit of variance prior by Gordon Smyth 49k

> is it advisable to asses the fit of the variance prior before running limma? No, neither necessary nor possible. If this sort of checki…

Votes

Answer: enrichGOgradient color change

Answer: Filter genes by expression for voomLmFit

How to know if I should use voomWithQualityWeights() or not?

Awards • All

Popular Question to Lluís Revilla Sancho ▴ 720

Scholar to Gordon Smyth 49k

Popular Question to Frederik Ziebell ▴ 20