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DNASeq
•
reset
0
votes
0
replies
556
views
Compare DNA sequence pairs and compute lengths and coordinates
DNASeq
CNEr
23 months ago
Md Abrar
• 0
0
votes
4
replies
2.5k
views
transformation of csv file to fasta format with biostrings and r studio
DNASeq
rstudio
fasta
Biostrings
csv
2.3 years ago
HELEN
• 0
0
votes
0
replies
568
views
Job:
Computational postdoctoral fellow for cancer disparities research (Boston University)
DNASeq
RNASeq
SingleCell
2.3 years ago
camp
• 0
0
votes
0
replies
501
views
Error in fragEnds[, 1] : incorrect number of dimensions while using printWigFile function in Basic4Cseq package
GenomicInteractions
Basic4Cseq
DNASeq
GenomicFiles
2.4 years ago
koushik
• 0
0
votes
0
replies
832
views
Doubt about the interpretation of cn.mops tumor vs normal results
cn.mops
dnaseq
bioinformatics
5.3 years ago
Cased
• 0
2
votes
3
replies
1.3k
views
Doubt about WL in cn.mops
dnacopy
dnaseq
genomic
cn.mops
cnv
updated 5.4 years ago by
Günter Klambauer
▴ 540 • written 5.4 years ago by
Cased
• 0
0
votes
1
reply
955
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq
pathway analysis
protein
biomarkers
5.8 years ago
emadelhewihy
• 0
0
votes
1
reply
1.1k
views
why merged paired end reads still have strand infomation?
dnaseq
rtracklayer
paired-end reads
6.4 years ago
zwfanwz678
• 0
0
votes
0
replies
1.0k
views
Centipede foot printing export
footprinting
centipede
atac-seq
dnaseq
6.7 years ago
rbronste
▴ 60
0
votes
0
replies
1.1k
views
any ideas on a workflow for exome seq data analysis with R?
exome
dnaseq
WES
7.5 years ago
arvand.akbari
• 0
0
votes
0
replies
1.7k
views
Job:
Bioinformatics Analyst at University of Cambridge, Cancer Research UK Cambridge Institute
job
jobs
rnaseq
chipseq
dnaseq
Job
8.2 years ago
Rory Stark
★ 5.1k
3
votes
2
replies
1.2k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.3 years ago by
James W. MacDonald
64k • written 8.3 years ago by
arado1
• 0
0
votes
1
reply
1.4k
views
Newbie - Adding Labels to Individual Genes with ggbio?
r
ggbio
ggplot2
dnaseq
genomicranges
updated 8.4 years ago by
arfranco
▴ 130 • written 8.4 years ago by
fathniz
• 0
8
votes
9
replies
5.7k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq
DNAseq
ATAC
bayespeak
narrowpeaks
updated 8.5 years ago by
Gordon Smyth
48k • written 8.5 years ago by
samuel collombet
▴ 140
9
votes
8
replies
8.7k
views
DEseq2 extended to open chromatin anlaysis: normalization, dispersion fit, and "too many" differences
deseq2
dnaseq
updated 9.2 years ago by
Michael Love
41k • written 9.2 years ago by
hughes.drew
▴ 100
1
vote
0
replies
1.4k
views
Bioconductor Employment: Statistical Research Associate
DNASeq
Cancer
DNASeq
Cancer
12.0 years ago
Martin Morgan
25k
16 results • Page
1 of 1
Recent ...
Replies
Comment: Why is DMRcate not available for Bioconductor version 3.18?
by
Daniel E. Weeks
▴ 20
Thank you for the explanation and contacting the DSS package authors.
Comment: Why is DMRcate not available for Bioconductor version 3.18?
by
shepherl
3.6k
The DSS package authors just need to add `edgeR` to their Suggest of their DESCRIPTION. They have been contacted about it but have not acte…
Answer: GOslim missing GO term
by
James W. MacDonald
64k
I think it's because that GO term isn't an offspring of any term in the GO slim you are downloading. ``` > ids<- "GO:0002831" > slim <…
Answer: Obtaining rsIDs with ENSG and variant ID information
by
Robert Castelo
★ 3.0k
You should first and foremost find out what was the human reference genome version from which your dataset was derived. Assuming this was G…
Comment: DESeq2 - groups with biological replicates from the same patient
by
James W. MacDonald
64k
If by clustering you mean there might be a within-subject correlation, then yes it's a possibility. But you cannot control for that using a…
Votes
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: limma::voom vs edgeR::voomLmFit - when to use?
Answer: limma::voom vs edgeR::voomLmFit - when to use?
Awards
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to
James W. MacDonald
64k
Scholar
to
Assa Yeroslaviz
★ 1.5k
Popular Question
to
Gordon Smyth
48k
Popular Question
to
Endre Sebestyén
▴ 70
Popular Question
to
ramonfallon
▴ 20
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