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2.9k

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Annotation limma beadarray bgx Annotation limma beadarray bgx

updated 10.9 years ago by Gordon Smyth 52k • written 10.9 years ago by Stefanie Busch ▴ 10

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1.8k

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bgx AgiMicroRna bgx AgiMicroRna

updated 12.9 years ago by Lucas Santana dos Santos ▴ 60 • written 12.9 years ago by Karthik K N ▴ 200

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2.0k

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Microarray Annotation Normalization vsn bgx puma Microarray Annotation Normalization vsn

updated 14.5 years ago by Benilton Carvalho ★ 4.3k • written 14.5 years ago by Rainer Tischler ▴ 60

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931

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Microarray affy bgx Microarray affy bgx

14.5 years ago Ernest Turro ▴ 30

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1.3k

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bgx BGmix bgx BGmix

15.6 years ago Lucas Santana dos Santos ▴ 60

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1.1k

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Annotation Cancer bgx Annotation Cancer bgx

16.6 years ago Lynn Amon ▴ 280

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Comment: Join BOC Sciences at Drug Discovery Chemistry 2024 by boltropeuniveraeidug • 0

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Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Votes

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

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