Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
bitseq
•
reset
5
votes
18
replies
3.2k
views
Incongruencies between DEXSeq and BitSeq/Cuffdiff
dexseq
bitseq
cuffdiff
Differential exon usage
isoforms
8.9 years ago
elle
▴ 10
0
votes
6
replies
1.7k
views
BitSeq input data error
BitSeq
BitSeq
updated 11.5 years ago by
Peter Glaus
▴ 70 • written 11.5 years ago by
Fatemehsadat Seyednasrollah
▴ 260
1
vote
5
replies
1.7k
views
using BitSeq data as input for spliceR
bitseq
spliceR
9.0 years ago
elle
▴ 10
2
votes
3
replies
1.3k
views
Technical and biological replates in BitSeq
BitSeq
bitseq
rnaseq
updated 8.6 years ago by
Ryan C. Thompson
★ 7.9k • written 8.6 years ago by
Sam McInturf
▴ 300
0
votes
2
replies
1.3k
views
BitSeq transcript IDs
Alignment
PROcess
BitSeq
Alignment
PROcess
BitSeq
updated 11.1 years ago by
Maayan Kreitzman
▴ 30 • written 11.1 years ago by
Peter Glaus
▴ 70
0
votes
1
reply
945
views
BitSeq getExpression (type=counts) - (why all 1 or higher)
BitSeq
updated 9.0 years ago by
Antti Honkela
▴ 50 • written 9.0 years ago by
dietmar.pils
• 0
0
votes
1
reply
971
views
BitSeq: Required input for 3' bias correction on transcripts.
RNASeq
BitSeq
RNASeq
BitSeq
updated 11.3 years ago by
Peter Glaus
▴ 70 • written 11.3 years ago by
Dave Gerrard
▴ 40
1
vote
1
reply
1.1k
views
BitSeq with paired samples
bitseq
paired samples
updated 8.8 years ago by
panagiotis.papastamoulis
▴ 30 • written 8.8 years ago by
MariaJoseG
• 0
0
votes
1
reply
1.1k
views
BitSeq getExpression crash
Alignment
PROcess
BitSeq
Alignment
PROcess
BitSeq
updated 11.1 years ago by
Peter Glaus
▴ 70 • written 11.1 years ago by
Maayan Kreitzman
▴ 30
0
votes
0
replies
855
views
SamBit input data error
BitSeq
BitSeq
11.5 years ago
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.5k
views
Differential expression workflow for alternative splicing
dexseq
bitseq
spliceR
9.0 years ago
elle
▴ 10
0
votes
0
replies
1.0k
views
BitSeq: Required input for 3' bias correction on transcripts.
RNASeq
safe
BitSeq
RNASeq
safe
BitSeq
11.3 years ago
Dave Gerrard
▴ 40
0
votes
0
replies
1.1k
views
BitSeq: Required input for 3' bias correction on transcripts.
Transcription
RNASeq
safe
BitSeq
Transcription
RNASeq
safe
BitSeq
11.2 years ago
Peter Glaus
▴ 70
13 results • Page
1 of 1
Recent ...
Replies
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
Awards
• All
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Popular Question
to
shepherl
3.9k
Popular Question
to
siajunren
• 0
Scholar
to
Rory Stark
★ 5.2k
Locations
• All
WEHI, Melbourne, Australia,
1 minute ago
France,
4 minutes ago
St Louis, MO,
1 hour ago
United States,
2 hours ago
United States,
3 hours ago
Traffic: 513 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6