Showing : bus • reset
0
votes
1
reply
888
views
Replacing an AffyBatch probe set
Normalization probe BUS Normalization probe BUS
updated 14.5 years ago by 67k • written 14.5 years ago by ▴ 20
0
votes
1
reply
1.4k
views
scanBam error with bamViews
BUS Rsamtools BUS Rsamtools
updated 14.5 years ago by 25k • written 14.5 years ago by ▴ 970
0
votes
0
replies
1.1k
views
lumi package
Cancer lumi BUS Cancer lumi BUS
15.2 years ago Weiwei Shi ★ 1.2k
0
votes
2
replies
1.6k
views
ReadAffy crashes on mac
Preprocessing affy convert affxparser affyio BUS Preprocessing affy convert affxparser
updated 16.4 years ago by ★ 1.2k • written 16.4 years ago by ▴ 40
0
votes
5
replies
1.6k
views
ReadAffy crashes on mac
affy BUS affy BUS
updated 16.4 years ago by ★ 2.4k • written 16.4 years ago by ★ 1.6k
0
votes
7
replies
1.8k
views
ReadAffy crashes R-devel on mac
BUS BUS
updated 16.9 years ago by 25k • written 16.9 years ago by ▴ 150
0
votes
0
replies
1.8k
views
update.packages() for bioconductor packages generates bus error in R.app for R-2.6.1 on Mac OS X
BUS BUS
17.1 years ago Steven McKinney ▴ 310
0
votes
4
replies
2.0k
views
[R-SIG-Mac] Mac os x graphviz-Rgraphviz problem
Biobase annotate geneplotter graph Rgraphviz BUS Biobase annotate geneplotter graph BUS
updated 17.9 years ago by ★ 7.4k • written 17.9 years ago by ★ 6.5k
0
votes
0
replies
1.4k
views
Mac os x graphviz-Rgraphviz problem
Biobase annotate graph Rgraphviz BUS Biobase annotate graph Rgraphviz BUS
17.9 years ago Gavai, Anand ▴ 40
0
votes
1
reply
940
views
[R-SIG-Mac] trouble running Bioconductor
limma BUS ASSIGN limma BUS ASSIGN
updated 18.4 years ago by ★ 7.4k • written 18.4 years ago by ▴ 430
10 results • Page 1 of 1
Recent ...
Replies
Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
Awards • All
Popular Question to Ali Barry ▴ 40
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Popular Question to martin.grigorov ▴ 10
Scholar to James W. MacDonald 67k
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