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deseq2 comparison batch

updated 4.8 years ago by Joana.silvestre • 0 • written 6.1 years ago by amin.ghareyazi • 0

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deseq2 comparison design paired treatment

updated 5.9 years ago by swbarnes2 ★ 1.4k • written 5.9 years ago by tinglec • 0

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DESeq2 DEG ANOVA Batch effect Comparison

updated 6.1 years ago by Michael Love 43k • written 6.1 years ago by amin.ghareyazi • 0

3 results • Page 1 of 1

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Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0

The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…

Answer: Gatins Set error by James W. MacDonald 68k

`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.

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Comment: readDNAStringSet with non DNA characters

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Popular Question to James W. MacDonald 68k