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BiomaRt connection error: Could not connect to mysql database ensembl_mart_104
biomaRt
connection
sql
updated 2.9 years ago by
Joan Miró
▴ 80 • written 2.9 years ago by
Anand
▴ 10
0
votes
4
replies
1.3k
views
how can I configure my proxy to get connected to biomart
biomart
connection
host
6.3 years ago
Bioinformatics
▴ 30
9
votes
9
replies
3.8k
views
biomaRt error when connecting to host
biomart
host
connection
updated 7.1 years ago by
Mike Smith
★ 6.5k • written 7.1 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
3
replies
1.4k
views
Unable to retrieve sequences using biomaRt::getsequence()
biomart
R
connection
updated 8.0 years ago by
James W. MacDonald
65k • written 8.0 years ago by
Brob
• 0
0
votes
0
replies
1.1k
views
Error in readCtData
htqpcr
readctdata
connection
readlines
8.0 years ago
lizhensor
• 0
5 results • Page
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Answer: Help with error using camera() in limma
by
James W. MacDonald
65k
The first step should be to read the help page, which says ``` Usage: ## Default S3 method: camera(y, index, design, cont…
Comment: Assist me in determining whether the analysis process using the limma package ha
by
James W. MacDonald
65k
The description of the analysis says there are 120 genes at a 1.5 fold change and a p<0.05. They don't mention any multiplicity correction.…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
When using `arrayWeights()`, you mean the variability within the same group, is that correct? I alway run `arrayWeights()` because I naive …
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Sey R.
• 0
Thank you for your response
Comment: Different number of exons in reference genome affects DEXSeq analysis
by
Alejandro Reyes
★ 1.9k
Hi Alessia. Makes sense. Something I use often are the support levels from ENSEMBL and the annotation of principal isoforms. These substant…
Votes
Comment: Why p value inconsistent when using different number of pathway score?
Nominations for Bioconductor Awards 2024!
Answer: Improving the design matrices vignette in RNAseq123
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
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