Biostar Coordinate

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200

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diffbind Rory Stark coordinate

updated 18 months ago by Rory Stark ★ 4.1k • written 19 months ago by Guandong Shang ▴ 20

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644

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dmrcate gene symbol coordinate

3.2 years ago 574233829 • 0

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485

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granges coordinate genome browser

updated 5.0 years ago by Michael Lawrence 11k • written 5.0 years ago by Charles Plessy ▴ 130

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1.9k

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r edgeR estimatedispersions coordinate

5.8 years ago pertille • 0

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17k

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tcga cnv gene symbol coordinate

updated 6.4 years ago by pshannon ▴ 90 • written 6.4 years ago by NS ▴ 60

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Comment: Returning to edgeR version 3.26.1? by mvanhorn • 0

Thank you very much for your reply! Our project is a reanalysis of large sets of RNA-seq data to identify circular RNAs using the CIRIquan…

Comment: "full model matrix is less than full rank" by ATpoint ▴ 840

My best guess is that young and old are not "young" or "old" but include some hidden whitespaces like " young" or "old ". That would then m…

Answer: Reading vcf file with readVcf by James W. MacDonald 58k

Usually when you run out of RAM, you usually get an error saying that 'R couldn't allocate a vector of size <some number>'. When it just sa…

Answer: Genic annotations of whole hg38 by James W. MacDonald 58k

What exactly do you mean by 'proportion of genic annotations'? One possibility would be to see what proportion of all the exons are covered…

Answer: Understanding output of Negative Binomial in DESeq2 by Michael Love 34k

> Does this mean that there are seven genes in total that will have significant adjusted p-value? yes > i recall when multiple linea…

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simultaneous use of robust and weighting methods in limma

Answer: Swish direction of comparison based on order of factors

Comment: Gradient dotplot

Answer: EdgeR, tumor normal pair, no replicatie but multiple patients, to focus on indi

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Scholar to Gordon Smyth 43k

Popular Question to Dario Strbenac ★ 1.5k

Popular Question to Hans-Ulrich Klein ▴ 330