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Showing :
gene symbol
•
reset
0
votes
4
replies
833
views
DESeq2 swap ensembl gene id rownames with gene symbol column
deseq2
dataframe
ensembl gene id
gene symbol
entrezid
2.7 years ago
jason.williams
• 0
0
votes
3
replies
992
views
DESeq2: removal of duplicated genes during statistical analysis
deseq2
gene symbol
ensembl
updated 3.7 years ago by
Michael Love
37k • written 3.7 years ago by
thkapell
▴ 10
1
vote
2
replies
574
views
Obtain GRanges object by gene names
GRanges
gene symbol
IdeoViz
3.7 years ago
Arman Shahrisa
▴ 20
0
votes
3
replies
863
views
DMRcate package :How to find the gene associated with coordinate
dmrcate
gene symbol
coordinate
4.1 years ago
574233829
• 0
0
votes
3
replies
1.1k
views
Choosing most accurate gene symbol from multiple gene symbols
transcript_id
gene symbol
updated 7.0 years ago by
James W. MacDonald
60k • written 7.0 years ago by
Jo
▴ 20
2
votes
4
replies
11k
views
biomartRt: convert mouse gene symbol return multiple human gene symbol
biomart
gene symbol
updated 7.1 years ago by
Diego Diez
▴ 760 • written 7.2 years ago by
chang02_23
▴ 20
0
votes
2
replies
2.5k
views
Mapping gene IDs to gene symbol of KEGG pathways with "Pathview"
Pathview
KEGG
annotation
gene symbol
visualization
updated 7.2 years ago by
Luo Weijun
★ 1.5k • written 7.2 years ago by
alakatos
▴ 120
3
votes
3
replies
2.0k
views
Different answer from Homo.sapiens and biomaRt packages!!
biomart
homo.sapiens
genome regions
gene symbol
updated 7.3 years ago by
Hervé Pagès
15k • written 7.3 years ago by
NS
▴ 60
25
votes
19
replies
19k
views
Mapping genome regions to gene symbols
tcga cnv
gene symbol
coordinate
updated 5 days ago by
michaelwegert
• 0 • written 7.3 years ago by
NS
▴ 60
0
votes
3
replies
1.9k
views
filtering out probes with no gene symbol from expressionSet
probe
filter
subset
gene symbol
affy
7.5 years ago
alakatos
▴ 120
10 results • Page
1 of 1
Recent ...
Replies
Comment: Retrieve gene summary start/end in biomart query
by
rbenel
▴ 20
Hi Mike, I have tried the query without the transcript, and I believe there are cases where I will receive unique transcript start/end si…
Comment: MMDiff2 memory issues
by
e.iich
• 0
running against a similar issue. Have you found any solutions?
Answer: mapToAlignments_issue
by
Hervé Pagès
15k
> I would expect in case of reverse alignment lifted ranges to correspond to position 91-100 of the query sequence. Nope. Local coordinate…
Answer: Problem related to `biomaRt::getBM()` during `R CMD check` execution
by
James W. MacDonald
60k
Does the section in the biomaRt vignette that talks about caching (and using a temp dir) help?
Comment: OPLS-DA: confidence interval for accuracy metric
by
Eddie
• 0
Worked well under pROC. Thank you
Votes
A: EGSEA error during report generation: "only 0's may be mixed with negative subsc
Answer: mapToAlignments_issue
Analysis of peaks generated from Homer using Diffbind
How to select summit size for histone ChiP-Seq in Diffbind
Comment: GSEA with Wikipathways not entirely reproducible
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e.iich
• 0
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Gordon Smyth
46k
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gv
▴ 40
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Hervé Pagès
15k
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ta_awwad
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