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Showing :
gene symbol
•
reset
0
votes
4
replies
1.9k
views
DESeq2 swap ensembl gene id rownames with gene symbol column
deseq2
dataframe
ensembl gene id
gene symbol
entrezid
3.8 years ago
jason.williams
• 0
0
votes
3
replies
1.5k
views
DESeq2: removal of duplicated genes during statistical analysis
deseq2
gene symbol
ensembl
updated 4.8 years ago by
Michael Love
40k • written 4.8 years ago by
thkapell
▴ 10
1
vote
2
replies
778
views
Obtain GRanges object by gene names
GRanges
gene symbol
IdeoViz
4.8 years ago
Arman Shahrisa
▴ 20
0
votes
3
replies
1.3k
views
DMRcate package :How to find the gene associated with coordinate
dmrcate
gene symbol
coordinate
5.2 years ago
574233829
• 0
0
votes
3
replies
1.3k
views
Choosing most accurate gene symbol from multiple gene symbols
transcript_id
gene symbol
updated 8.1 years ago by
James W. MacDonald
63k • written 8.1 years ago by
Jo
▴ 30
2
votes
4
replies
12k
views
biomartRt: convert mouse gene symbol return multiple human gene symbol
biomart
gene symbol
updated 8.2 years ago by
Diego Diez
▴ 760 • written 8.4 years ago by
chang02_23
▴ 20
0
votes
2
replies
3.0k
views
Mapping gene IDs to gene symbol of KEGG pathways with "Pathview"
Pathview
KEGG
annotation
gene symbol
visualization
updated 8.3 years ago by
Luo Weijun
★ 1.6k • written 8.3 years ago by
alakatos
▴ 130
3
votes
3
replies
2.6k
views
Different answer from Homo.sapiens and biomaRt packages!!
biomart
homo.sapiens
genome regions
gene symbol
updated 8.4 years ago by
Hervé Pagès
16k • written 8.4 years ago by
NS
▴ 60
27
votes
21
replies
22k
views
Mapping genome regions to gene symbols
tcga cnv
gene symbol
coordinate
updated 10 months ago by
James W. MacDonald
63k • written 8.4 years ago by
NS
▴ 60
0
votes
3
replies
2.3k
views
filtering out probes with no gene symbol from expressionSet
probe
filter
subset
gene symbol
affy
8.6 years ago
alakatos
▴ 130
10 results • Page
1 of 1
Recent ...
Replies
Comment: Speeding up of DelayedArray::write_block()
by
Koki
▴ 10
I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…
Comment: DelayedArray::read_sparse_block
by
Koki
▴ 10
Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?
Comment: DelayedArray::read_sparse_block
by
Hervé Pagès
16k
> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …
Comment: DelayedArray::read_sparse_block
by
Koki
▴ 10
Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…
Comment: DMRcate design
by
James W. MacDonald
63k
That's what identical context means.
Votes
Answer: What MetaPhlAn3 database was used in cMD 3?
Comment: Speeding up of DelayedArray::write_block()
Answer: DelayedArray::read_sparse_block
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
Comment: Timely differentially expressed genes
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