Showing : ctc • reset
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Finding coding SNPs with predictCoding
SNP ctc SNP ctc
updated 12.2 years ago by ★ 1.7k • written 12.2 years ago by ★ 6.8k
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2
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Finding coding SNPs with predictCoding
SNP Annotation BSgenome ctc BSgenome cycle genomes SNP Annotation BSgenome ctc BSgenome
updated 12.1 years ago by ★ 1.7k • written 12.1 years ago by ★ 6.8k
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1.1k
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Xcluster
Microarray ctc Microarray ctc
18.8 years ago Antoine Lucas ▴ 100
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1.1k
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.6 years ago Goeman, J.J. MSTAT ▴ 150
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1.1k
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.6 years ago rgentleman ★ 5.5k
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1.1k
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Errors w/ getBioC(develOK =TRUE) with R2.0 devel
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.7 years ago Matthew Hannah ▴ 940
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Errors w/ getBioC()
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
19.7 years ago Matthew Hannah ▴ 940
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0
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1000
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Updated ctc package available
ctc ctc
21.2 years ago Jeff Gentry ★ 3.9k
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906
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ctc::hc2Newick branch length errors?
ctc ctc
11.1 years ago Narayanan, Manikandan NIH/NIAID [E] ▴ 60
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Queries on the 4x44PreProcess Package
Normalization ctc limma Agi4x44PreProcess Normalization ctc limma Agi4x44PreProcess
15.2 years ago Pedro López Romero ▴ 360
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827
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Query regarding Clustering
Clustering ctc Clustering ctc
updated 14.0 years ago by ▴ 120 • written 14.0 years ago by 21k
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:Export 1 way cluster to treeview
Clustering ctc Clustering ctc
19.4 years ago Anthony Bosco ▴ 500
12 results • Page 1 of 1
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Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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