Bioconductor Degseq

Showing : degseq • reset

0

votes

9

replies

589

views

limma DEGseq

updated 11 weeks ago by James W. MacDonald 65k • written 12 weeks ago by mia • 0

0

votes

1

reply

531

views

RNASeqData DEGseq

updated 9 months ago by ATpoint ★ 4.1k • written 9 months ago by sybyun419 • 0

0

votes

2

replies

583

views

DEGseq RNASeqData limma

updated 11 months ago by Gordon Smyth 50k • written 11 months ago by Shaimaa Gamal • 0

3 results • Page 1 of 1

Recent ...

Replies

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Votes

Rsubread counting peaks ATACseq

Awards • All

Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180