Bioconductor Dese

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DESeq2 lfcshrink DESe

updated 11 months ago by Michael Love 41k • written 11 months ago by Alina • 0

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163

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DESeq2 Dese

updated 4 weeks ago by Michael Love 41k • written 5 weeks ago by Léa • 0

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Dese DESeq2

11 months ago • updated 10 months ago Asger Mølgaard • 0

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803

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DESe DESeq2

9 months ago Adèle • 0

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254

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dese DESeq2

3 months ago • updated 12 weeks ago pl23 • 0

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DESeq2 Dese DifferentialRegulation differe

updated 6 weeks ago by feather-W • 0 • written 12 months ago by Bernardo ▴ 10

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397

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dese DESeq2

4 months ago Hugo • 0

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249

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DESeq2 dese

updated 10 weeks ago by ATpoint ★ 4.0k • written 10 weeks ago by Xu • 0

8 results • Page 1 of 1

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Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0

Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…

Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

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Answer: Dominance Index for Shotgun Metagenomics Data

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

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