Showing : design model • reset
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Help with multi-factored RNA-seq edgeR model
edger design model interaction model rnaseq
updated 3.4 years ago by 59k • written 3.4 years ago by • 0
0
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5
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1.0k
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DESeq2 package : Error in checkFullRank(modelMatrix) while designing multi factor
DESeq2 multiple factor design design model design matrix rna-seq
updated 3.4 years ago by 37k • written 3.4 years ago by • 0
4
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7
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Question: Pair-wise DESeq Analysis with 3 Factor Levels - RNA-Seq
deseq2 design model rnaseq multiple factor levels
updated 3.5 years ago by 37k • written 3.5 years ago by • 0
2
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4
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2.8k
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Age covariate continuous vs. categorical
deseq2 linear model covariates age design model
updated 4.3 years ago by 37k • written 4.3 years ago by • 0
4 results • Page 1 of 1
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Comment: error with: .make_splicings <- function(exons, cds, stop_codons=NULL) by Hervé Pagès 15k
And also please don't ignore these warnings: 1: package ‘GenomicFeatures’ was built under R version 4.1.1 2: package ‘BiocGenerics’ was b…
Comment: broken chain import in liftOver by Marcel Ramos 570
You could also try using one of the chain files in `AnnotationHub`, which gets auto-cached: ```r library(AnnotationHub) query(ah <- Annot…
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated. by James W. MacDonald 59k
See `removeBatchEffect` in the `limma` package.
Comment: GDCdownload Directory Problem :( by Marcel Ramos 570
FWIW, `TCGAutils` is not a related package.
Comment: help please！ by 1051444231 • 0
I have updated Rtools
Votes
Answer: broken chain import in liftOver
Answer: toGRanges help!
Answer: toGRanges help!
Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
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