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dupradar
•
reset
0
votes
2
replies
416
views
Fail to run RupRadar
dupRadar
12 months ago
Qingwei
• 0
0
votes
0
replies
409
views
dupRadar density scatter plot interpretation problem
dupRadar
18 months ago
Greta
• 0
0
votes
1
reply
580
views
dupRadar: low % of duplicates for 150bp PE RNAseq
dupRadar
150bp
RNA-seq
updated 2.8 years ago by
sergisayolspuig
▴ 80 • written 2.8 years ago by
olegderyagin
• 0
3
votes
4
replies
1.1k
views
File not found error when using dupRadar::analyzeDuprates
dupradar
rsubread
updated 4.9 years ago by
Gordon Smyth
47k • written 4.9 years ago by
b.nota
▴ 360
1
vote
2
replies
814
views
dupRadar parameter for single-end RNA-Seq data
dupRadar
updated 6.6 years ago by
sergisayolspuig
▴ 80 • written 7.1 years ago by
Gary
▴ 20
1
vote
1
reply
872
views
DupRadar and Picard2.6.0
dupradar
updated 6.6 years ago by
sergisayolspuig
▴ 80 • written 6.8 years ago by
ekornobis
▴ 10
6 results • Page
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Comment: Interpret plot from DiffBind
by
Chris
• 0
I sorted Fold decreasing. When I filter out genes with fold > 2.5 and filter out genes with fold < -2.5 and got 1287 genes appear in both s…
Comment: Interpret plot from DiffBind
by
Chris
• 0
Thank you so much. I think the function is `dba.report()`. more_open_in_disease: 79113 more_closed_in_disease: 36828 So there are 79113 pea…
Comment: Interpret plot from DiffBind
by
Chris
• 0
Hi Rory, when I run your code, I got this error: Error: unexpected ')' in: " matrices_color=list(c("white", "ma…
Comment: Can DESeq2 handle huge variations in sequencing depth among samples?
by
Gopinath
• 0
Thanks for your suggestion, Michael. I will try that strategy.
Comment: Error with IsoformSwitchAnalyzer: analyzePFAM
by
Callum
• 0
It seems that the problem doesn't occur when the input file is significantly shortened to ~20 transcripts! Please help
Votes
A: ggbio error: Objects of type OrganismDb not supported by autoplot
Answer: DeSEQ 2 Error: some values in assay are negative
DESeq2 Error from Installing a Package
Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)
Comment: Error: biomaRt has encountered an unexpected server error.
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