Bioconductor Dupradar

Showing : dupradar • reset

votes

replies

542

views

dupRadar

16 months ago Qingwei • 0

votes

replies

475

views

dupRadar

21 months ago Greta • 0

votes

661

views

dupRadar 150bp RNA-seq

updated 3.1 years ago by sergisayolspuig ▴ 80 • written 3.1 years ago by olegderyagin • 0

votes

replies

1.2k

views

dupradar rsubread

updated 5.2 years ago by Gordon Smyth 48k • written 5.2 years ago by b.nota ▴ 360

vote

replies

890

views

dupRadar

updated 6.9 years ago by sergisayolspuig ▴ 80 • written 7.4 years ago by Gary ▴ 20

vote

934

views

dupradar

updated 6.9 years ago by sergisayolspuig ▴ 80 • written 7.1 years ago by ekornobis ▴ 10

6 results • Page 1 of 1

Recent ...

Replies

Comment: Exporting DESeq2 filtered results by camillab. ▴ 10

can you elaborate? I am confused. I have the same problem: cond1 <- results(dds, contrast=c("condition","Patient","Control"), alpha = …

Comment: Effect of lfcThreshold on p-value in DESeq2 by camillab. ▴ 10

great so the best approach would be using the lfcThreshold parameter to make sure that both p.value and log2fc are taken into account in t…

Comment: HTSeqGenie runs very slow by zh9118 • 0

I found that it's always the last chunk that took time forever, even though the last chunk is the smallest one. ![enter image description …

Answer: Error MakeOrgPackagefromNCBI by James W. MacDonald 63k

You will rarely find a particular strain in any annotation data, and instead you should use the 'main' taxon ID, which for *A. baumannii* h…

Comment: Setting up a multi-factor experiement by john.briseno • 0

thanks, will do! we work with a non-model organism, but perhaps the folks who do our genomics/sequencing have some input.

Votes

A: Effect of lfcThreshold on p-value in DESeq2

Comment: Mixed up sample info with plotPCA

Answer: Setting up a multi-factor experiement

Answer: Mouse to Human Genes using bioconductor

Mouse to Human Genes using bioconductor

Awards • All