Bioconductor Ebarrays

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EBarrays EBarrays

14.4 years ago jgomez@uni-potsdam.de ▴ 30

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EBarrays EBarrays

updated 17.2 years ago by Sean Davis 21k • written 17.2 years ago by affy snp ▴ 640

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Microarray GO affy limma EBarrays Microarray GO affy limma EBarrays

updated 20.3 years ago by Marcus ▴ 150 • written 20.3 years ago by Marcus Davy ▴ 680

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Microarray Ruuid graph limma EBarrays Microarray Ruuid graph limma EBarrays

21.5 years ago • updated 21.4 years ago madman@jimmy.harvard.edu ▴ 850

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EBarrays EBarrays

updated 21.4 years ago by Marcus Davy ▴ 680 • written 21.4 years ago by Arne.Muller@aventis.com ▴ 620

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Microarray EBarrays Microarray EBarrays

21.5 years ago Jeff Gentry ★ 3.9k

6 results • Page 1 of 1

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Comment: EuroBioC2024 abstract submission is open! by rajilrfaze • 0

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Comment: p-adjusted values in multiple comparisons by ocanorocabayera • 0

Thank you Gordon for your thorough reply. It seems when MDS-plotting the obtained object from 'voom', that the points do not cluster togeth…

Comment: Are voomByGroup and voomLmFit compatible? by Gordon Smyth 52k

Not sure what "points" you are referring to, or what you mean by them being "weighted".

Answer: p-adjusted values in multiple comparisons by Gordon Smyth 52k

If your data was completely random, with no truly differentially expressed (DE) genes, then you would expect to get nearly 5% of the p-valu…

Answer: Are voomByGroup and voomLmFit compatible? by Gordon Smyth 52k

voomByGroup isn't part of Bioconductor, so questions about it should be send to the voomByGroup issues page. I haven't brought voomByGroup…

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Answer: p-adjusted values in multiple comparisons

Comment: Very different log2 Fold changes with DESeq2 and explict calculation

Answer: (Why) do limma's confidence intervals depend on topTable's p.value argument?

Answer: Very different log2 Fold changes with DESeq2 and explict calculation

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