Bioconductor Ebarrays

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EBarrays EBarrays

14.7 years ago jgomez@uni-potsdam.de ▴ 30

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1.1k

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EBarrays EBarrays

updated 17.5 years ago by Sean Davis 21k • written 17.5 years ago by affy snp ▴ 640

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1.7k

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Microarray GO affy limma EBarrays Microarray GO affy limma EBarrays

updated 20.7 years ago by Marcus ▴ 150 • written 20.7 years ago by Marcus Davy ▴ 680

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1.9k

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Microarray Ruuid graph limma EBarrays Microarray Ruuid graph limma EBarrays

21.8 years ago • updated 21.7 years ago madman@jimmy.harvard.edu ▴ 850

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1.8k

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EBarrays EBarrays

updated 21.8 years ago by Marcus Davy ▴ 680 • written 21.8 years ago by Arne.Muller@aventis.com ▴ 620

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1.3k

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Microarray EBarrays Microarray EBarrays

21.8 years ago Jeff Gentry ★ 3.9k

6 results • Page 1 of 1

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Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by jtsy6383 • 0

Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…

Answer: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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