Bioconductor Ebarrays

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EBarrays EBarrays

14.4 years ago jgomez@uni-potsdam.de ▴ 30

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EBarrays EBarrays

updated 17.3 years ago by Sean Davis 21k • written 17.3 years ago by affy snp ▴ 640

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Microarray GO affy limma EBarrays Microarray GO affy limma EBarrays

updated 20.4 years ago by Marcus ▴ 150 • written 20.4 years ago by Marcus Davy ▴ 680

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Microarray Ruuid graph limma EBarrays Microarray Ruuid graph limma EBarrays

21.5 years ago madman@jimmy.harvard.edu ▴ 850

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EBarrays EBarrays

updated 21.5 years ago by Marcus Davy ▴ 680 • written 21.5 years ago by Arne.Muller@aventis.com ▴ 620

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Microarray EBarrays Microarray EBarrays

21.5 years ago Jeff Gentry ★ 3.9k

6 results • Page 1 of 1

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Comment: Average biological replicates in RNA-seq by boczniak767 ▴ 740

@atpoint Should I first standardise data and then average replicates?

Comment: 3-factor DESeq2 trime-series analysis by gogeni5529 • 0

Thans you @swbarnes2 for the answer. I can see why trying to include all three parameters might be difficult to interpret. But we're inte…

Comment: 3-factor DESeq2 trime-series analysis by swbarnes2 ★ 1.4k

What does your PCA look like? A lot of times, I find that different cell lines are so different from each other, that they should not be d…

Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by yongjie.wang • 0

Thanks for your reply. " normFactors <- exp(-1 * offst(set2)) normFactors <- normFactors / exp(rowMeans(log(normFactors))) normalizat…

Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by Michael Love 43k

I'm not familiar with this usage, or code here ``` normFactors <- exp(-1 * offst(set2)) ``` In the RNA-seq gene-level workflow, we …

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Answer: Limpa Pipeline Order

A: How barcode-plot enrichment is calculated?

Answer: ROAST compare results with complex design

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

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Popular Question to Assa Yeroslaviz ★ 1.5k