Bioconductor Fastmnn

Showing : fastmnn • reset

votes

replies

1.2k

views

scanpy scRNAseq fastmnn r

23 months ago Madiha • 0

votes

replies

1.4k

views

batchelor fastMNN scRNAseq

2.1 years ago Guandong Shang ▴ 40

votes

replies

2.3k

views

scater batchelor scRNAseq fastMNN

updated 2.1 years ago by Aaron Lun ★ 28k • written 2.1 years ago by Guandong Shang ▴ 40

votes

replies

1.2k

views

fastmnn batchelor BatchEffect

3.0 years ago p.joshi ▴ 40

votes

1.3k

views

fastmnn scater batchelor

updated 4.2 years ago by Aaron Lun ★ 28k • written 4.3 years ago by ATpoint ★ 4.4k

votes

replies

672

views

fastMNN Interpretation

4.3 years ago mloza ▴ 10

votes

1.2k

views

batchelor batch-correction mnncorrect fastmnn rna-seq

updated 4.4 years ago by Aaron Lun ★ 28k • written 5.1 years ago by rmf ▴ 20

vote

replies

1.5k

views

fastMNN CITE-seq ADT-seq batchelor REAP-seq

updated 4.5 years ago by Aaron Lun ★ 28k • written 4.5 years ago by sorjuelal • 0

vote

replies

1.5k

views

SCRAN fastMNN mnnCorrect

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by tobi • 0

9 results • Page 1 of 1

Recent ...

Replies

Comment: Issue Installing Biostrings Package: gcc Compilation Errors by tiffanygrimmet • 0

@[tiny fishing](https://tiny-fishing.com) : You below have made too many mistakes in line 20, you have made quite a few mistakes in line 20…

Comment: How to use compareCluster in ClusterProfiler? by cynthiamoniz1122 • 0

@[poppy playtime chapter 3](https://poppyplaytimechapter3.io): Your code provides quite complete information, you code very detailed and sp…

Comment: Should tSNE from biol. replicates look alike? by cynthiamoniz1122 • 0

good ideal

Answer: Trying to convert ATACseq annotations of non-model species into human orthologs, by James W. MacDonald 67k

I would use the mapper I note above, and build your own `OrgDb`, then do the GO analysis directly. ``` > library(AnnotationForge) > option…

Comment: Trying to convert ATACseq annotations of non-model species into human orthologs, by James W. MacDonald 67k

There's already an `OrgDb` for this species on the AnnotationHub that hypothetically would be ideal, but there are almost no GO mappings, s…

Votes

Answer: Generation of QSEA TCGA 450K Human Methylation Calibration Dataset

A: Generation of QSEA TCGA 450K Human Methylation Calibration Dataset

Comment: clusterProfiler: BgRatio N value does not match the size of the gene universe th

Awards • All