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featurerequest
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Rsubread Read Bam and filter reads by TAG field
Rsubread
featurecounts
featurerequest
6.3 years ago
alessandro.pastore
▴ 20
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1.1k
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Tab on Main menu
bioconductor
featurerequest
updated 6.7 years ago by
Sean Davis
21k • written 6.7 years ago by
Justin Meskas
▴ 60
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Pull request for customProDB package
customProDB
featurerequest
updated 8.0 years ago by
Dan Tenenbaum
★ 8.2k • written 8.0 years ago by
matt.chambers42
▴ 10
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[ChIPseeker; feature request] More flexibility in specifying the TSS region
ChIPseeker
featurerequest
tss
updated 8.2 years ago by
Guangchuang Yu
★ 1.2k • written 8.2 years ago by
balwierz
▴ 40
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Feature Request: improve output when printing GenomicRanges instances
GenomicRanges
featurerequest
8.7 years ago
Keith Hughitt
▴ 180
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Comment: deseq2 results
by
swbarnes2
★ 1.3k
It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…
Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Dylan.Sheerin
• 0
Thank you very much, Gordon. I'll give voomLmFit a go!
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Gordon Smyth
50k
Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…
Comment: Log-cpm values from limma
by
Gordon Smyth
50k
No, it does not mean that. `voom()` uses the design matrix, including the W covariates, to compute precision weights but not to adjust the …
Comment: Extremely small p-values using Limma for proteomic data
by
Abbey
• 0
This is the code. The only part I changed was adding the contrasts.fit as you suggested. Thanks for taking a look! ``` # Load necessary …
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Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
Answer: Extremely small p-values using Limma for proteomic data
Bioconductor 3.19 is Released!
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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