Bioconductor Tss

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7.9k

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atacseq atacseqqc tss enrichment

updated 3.3 years ago by Ou, Jianhong ★ 1.3k • written 3.3 years ago by Arpi Beshlikyan • 0

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1.0k

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GenomicRanges Views ATACseq TSS

4.6 years ago tangming2005 ▴ 190

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791

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TSS promoter cage cager

5.0 years ago bharata1803 ▴ 60

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1.6k

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repitools promoter tss annotation

5.7 years ago Ryan C. Thompson 7.8k

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1.8k

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tximport differential isoform usage salmon tss rna-seq

6.4 years ago Steffen Heyne ▴ 10

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2.9k

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chip-seq TSS TMM csaw

updated 7.5 years ago by Aaron Lun ★ 28k • written 7.5 years ago by saadmurtazakhan ▴ 10

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1.2k

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ChIPseeker featurerequest tss

updated 7.8 years ago by Guangchuang Yu ★ 1.2k • written 7.8 years ago by balwierz ▴ 40

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Comment: NCBI protein conversion to CDNA and NCBI gene (in R) by Gordon Smyth 48k

Continuation of https://support.bioconductor.org/p/9155428/

Comment: Why is DMRcate not available for Bioconductor version 3.18? by Tim Peters ▴ 150

Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…

Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R by R_Page • 0

Thank you, this works well. As for CDNA, I figured out what I need to find, and have made a new post regarding it.

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Hello Michael, I am continuing here and need your expert answer on this again I have performed small rna loci and DNA methylation mappin…

Comment: GOslim missing GO term by amanda • 0

Thank you for the advice and many thanks! It is WGCNA analysis. I will try your method today and see if there are some consistencies.

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Answer: Differential gene expression analysis

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Why is DMRcate not available for Bioconductor version 3.18?

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