Bioconductor Gene network

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microarray gene network WGCNA

updated 5.8 years ago by Bioconductor Community 0 • written 5.8 years ago by GENOMIC_region • 0

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PSICQUIC gene network

updated 7.2 years ago by Paul Shannon ▴ 470 • written 7.2 years ago by badredda • 0

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job computational biology simulation evolution Gene network Job

7.3 years ago isaac.salazar • 0

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Answer: DESeq Input from Salmon + tximport/tximeta by Michael Love 42k

Given nf-core's pipeline here, you can use rounded counts from `gene_counts_length_scaled.tsv`.

Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by josephjohnsonlo • 0

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Comment: Question about using LRT test for time course experiments with DESeq2 by James W. MacDonald 67k

You don't want to add a logFC on top like that, as it invalidates the p-value. Maybe I wasn't clear before. The LRT gives you all the gene…

Comment: Question about using LRT test for time course experiments with DESeq2 by Denise • 0

Hi James, Thank you very much for your very detailed explanation! I guess my question is simpler than that, I just want to union, across…

Answer: featureCounts segmentation fault with large chromosomes by vkkodali ▴ 10

Thanks to @yangliao this issue is fixed in subread v2.0.8

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