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genemeta
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458
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H bond prediction of two sequences
GeneMeta
generegulation
2.5 years ago
Marcus
• 0
5
votes
4
replies
2.0k
views
meta analysis of microarrays of small sample sizes
preprocessing
microarray
genemeta
updated 8.4 years ago by
alexvpickering
▴ 110 • written 8.4 years ago by
Lian Liu
▴ 20
0
votes
2
replies
1.8k
views
Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd
GeneMeta
metaArray
RankProd
GeneMeta
metaArray
13.6 years ago
boczniak767
▴ 740
0
votes
0
replies
1.1k
views
Obtaining unadjusted permutation p-value from GeneMeta package
GeneMeta
GeneMeta
14.4 years ago
Seungwoo Hwang
▴ 80
0
votes
0
replies
1.2k
views
GeneMeta for 2 color microarray
Microarray
limma
GeneMeta
Microarray
limma
GeneMeta
14.9 years ago
Paul Leo
▴ 970
0
votes
6
replies
1.7k
views
Combining two datasets - help to use GeneMeta.
rae230a
affy
GeneMeta
rae230a
affy
GeneMeta
updated 18.8 years ago by
Darlene Goldstein
▴ 230 • written 18.8 years ago by
Sharon Anbu
▴ 480
0
votes
0
replies
941
views
question about the GeneMeta package
GeneMeta
GeneMeta
19.7 years ago
ivan.borozan@utoronto.ca
▴ 80
7 results • Page
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Answer: affy::rma results doesn't match with ncbi website
by
ATpoint
★ 4.7k
Exact OMCIS reproduction down to the values without code and software version is borderline impossible. Either use the values as provided o…
Answer: Use of org.Rn.eg.db with GRCr8 reference genome
by
James W. MacDonald
68k
You've got it backwards. It should be ``` adult_res_df$symbol <- mapIds(org.Rn.eg.db, keys = rownames(adult_res_df), column = "ENSEMBL"…
Comment: DESeq2 swap ensembl gene id rownames with gene symbol column
by
Erika
• 0
Alternatively, you could have added a column with the common gene names. Assuming your dataframe `df` was created using `DESeq()`, somethin…
Answer: Clarification on GOALL / GO2ALLORFs mapping
by
James W. MacDonald
68k
It appears that 'negative regulation of glycogen biosynthesis' has an 'is a' relationship with 'glycogen biosynthetic process' https://www.…
Comment: Can't post a question?
by
DavideSant
• 0
Thank you, this was super useful!
Votes
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
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