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genomic
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reset
11
votes
13
replies
5.1k
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How to retrieve genomic coordinates for a list of entrezID and their respective gene names
genomic
AnnotationHub
GenomicRanges
org.Hs.eg.db
4.0 years ago • updated 3.9 years ago
rohitsatyam102
▴ 20
2
votes
3
replies
1.7k
views
Doubt about WL in cn.mops
dnacopy
dnaseq
genomic
cn.mops
cnv
updated 6.4 years ago by
Günter Klambauer
▴ 540 • written 6.4 years ago by
Cased
• 0
0
votes
2
replies
725
views
EpiDISH- from Genomic Cordinate
genomic
EpiDISH
updated 23 months ago by
shijieczheng
• 0 • written 23 months ago by
bony.dekumar
▴ 10
0
votes
2
replies
1.2k
views
GRanges::distanceToNearest does not return distance to nearest
GenomicRanges
Genomic
3.3 years ago
Daniel Cameron
▴ 40
1
vote
1
reply
1.6k
views
GenomicRanges equivalent to bedtools cluster
IRanges
GenomicRanges
updated 4.1 years ago by
James W. MacDonald
67k • written 4.1 years ago by
kalamari
• 0
0
votes
0
replies
1.0k
views
Job:
Data Manager - BC Cancer Research Center, Vancouver BC
computational
genomic
big data
bioinformatics
Job
5.5 years ago
jmaanaki
• 0
6 results • Page
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Answer: Can we get beta values with DMRcate package
by
James W. MacDonald
67k
If you get an error that says ``` Error in getCollapsedBetas(myAnnotation) : could not find function "getCollapsedBetas" ``` It …
Comment: What type of counts data to import for performing Isoform analysis in edgeR
by
ATpoint
★ 4.6k
I think this already happened, see https://github.com/nf-core/rnasplice/issues/162
Comment: What type of counts data to import for performing Isoform analysis in edgeR
by
Phil
▴ 10
All nf-core pipelines can be run with any additional tool CLI flags, on a per-user basis without editing any pipeline code. See docs on how…
Comment: Running multiple KNN queries in parallel
by
SamGG
▴ 360
Thank you for your detailed answer, I appreciate it and your work.
Answer: Running multiple KNN queries in parallel
by
Aaron Lun
★ 28k
That is correct - you can't pass the prebuilt objects to different processes. Maybe `MulticoreParam()` might work on POSIX systems but I'm …
Votes
Answer: RSubread output significantly different from bash Subread output
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: Running multiple KNN queries in parallel
Answer: Running multiple KNN queries in parallel
Answer: RSubread output significantly different from bash Subread output
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