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gosummaries
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Error using gosummaries (GOsummaries) on small log2 fold change values
gosummaries
gene ontology
enrichment analysis
6.8 years ago
jan.soderman
• 0
0
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2
replies
1.6k
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Properly assigning gene list objects in GOsummaries
gosummaries
updated 7.3 years ago by
Raivo Kolde
▴ 50 • written 7.3 years ago by
Bohdan Khomtchouk
▴ 10
0
votes
3
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1.8k
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Package ‘GOsummaries’ --- ENTREZID does not work
GOsummaries
software error
9.5 years ago
alakatos
▴ 130
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Answer: Deseq2 res Function
by
Michael Love
43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR
by
Gordon Smyth
51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data
by
Gordon Smyth
51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix?
by
NB
• 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix?
by
James W. MacDonald
67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Votes
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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