Showing : lpe • reset
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PLPE error
Microarray affy LPE PLPE Microarray affy LPE PLPE
15.3 years ago Dennis.Burian@faa.gov ▴ 90
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18
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2.3k
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LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer gcrma LPE affylmGUI Cancer gcrma LPE affylmGUI
updated 15.5 years ago by ▴ 70 • written 15.5 years ago by ★ 13k
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2
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LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer gcrma LPE Cancer gcrma LPE
updated 15.5 years ago by ★ 1.6k • written 15.5 years ago by ▴ 70
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3
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1.6k
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Bioconductor 2.3 is released
aCGH Sequencing miRNA Microarray Visualization Bayesian Classification Survival Yeast LPE
15.5 years ago Patrick Aboyoun ★ 1.6k
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A friendly mention of LPE package
LPE LPE
16.2 years ago pingzhao Hu ▴ 210
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3
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2.6k
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Inherits(x,"data.frame") error in SamR
Microarray Normalization Preprocessing Bayesian Clustering TimeCourse Cancer affy vsn LPE
18.2 years ago McGee, Monnie ▴ 300
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852
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LPE question
LPE LPE
18.2 years ago Jain, Nitin ▴ 70
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878
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incoherence with LPE
LPE LPE
18.7 years ago Jain, Nitin ▴ 70
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0
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860
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LPE method based on RMA vs. MAS5
Preprocessing LPE Preprocessing LPE
18.7 years ago Jain, Nitin ▴ 70
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830
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pools and tech rep
limma LPE limma LPE
18.9 years ago Ariel Chernomoretz ▴ 380
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1
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983
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FDR adjustment in LPE
LPE LPE
updated 19.0 years ago by ▴ 70 • written 19.0 years ago by ▴ 40
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1
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947
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local pooled error
LPE LPE
updated 19.1 years ago by ▴ 210 • written 19.1 years ago by ★ 1.3k
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LPE
cdf affy LPE ASSIGN cdf affy LPE ASSIGN
19.2 years ago Jain, Nitin ▴ 70
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1
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1.1k
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Help with LPE error message
LPE LPE
updated 19.2 years ago by ▴ 70 • written 19.2 years ago by ▴ 140
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815
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LPE
cdf affy LPE ASSIGN cdf affy LPE ASSIGN
19.2 years ago Harry Hurd ▴ 60
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1
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1.0k
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LPE errors
LPE LPE
updated 19.4 years ago by ▴ 70 • written 19.4 years ago by ▴ 40
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0
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1.0k
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LPE error and warnings
LPE LPE
19.5 years ago Stephanie Mewborn ▴ 40
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1
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1.2k
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problem with LPE
LPE LPE
updated 20.2 years ago by ▴ 30 • written 20.2 years ago by ▴ 720
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7
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1.7k
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Statistical comparison of low replicate affy data
affy gcrma siggenes LPE affy gcrma siggenes LPE
20.2 years ago Matthew Hannah ▴ 940
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Limma or something else ? plus Normalization question
Normalization affy limma LPE PROcess Normalization affy limma LPE PROcess
20.6 years ago Gordon Smyth 50k
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1
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962
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Limma or something else ? plus Normalization question
limma LPE PROcess limma LPE PROcess
updated 20.6 years ago by 50k • written 20.6 years ago by ▴ 720
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question about RMA and filtering
affy LPE affy LPE
20.8 years ago Phguardiol@aol.com ▴ 720
22 results • Page 1 of 1
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Comment: CombineArrays for EPIC and EPIC V2 by Kim • 0
Thank you Tim, this is a great help in getting me started!
Comment: Too many significant genes when integrating gtex and tcga by Michael Love 41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Answer: Too many significant genes when integrating gtex and tcga by James W. MacDonald 65k
See `?results`, in particular the lfcThreshold argument.
Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis by Aurora • 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
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Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
stuck on unimplemented type 'list' in 'EncodeElement'
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