Showing : maanova • reset
0
votes
5
replies
5.4k
views
Statistical power of limma vs mixed model approach to analyze microarray and differentialproteomics/peptidomics experiments and Poisson/binomial mixe…
limma maanova rnaseq
12.4 years ago • updated 3.9 years ago Gordon Smyth 53k
0
votes
0
replies
1.0k
views
multicore version of maanova
maanova maanova
12.1 years ago Guest User ★ 13k
0
votes
0
replies
2.0k
views
R / Maanova: contrasts for interaction in model with 2 fixed factors
maanova maanova
13.5 years ago V. Oostra ▴ 30
0
votes
0
replies
949
views
Cross-comparison of independent intensities from different experiments (genepix) (sorry I don\'t know how to describe the problem better)
limma maanova limma maanova
13.8 years ago James W. MacDonald 68k
0
votes
1
reply
1.7k
views
CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 14.0 years ago by ▴ 430 • written 14.0 years ago by ▴ 10
0
votes
0
replies
990
views
R/BioC/Mac keeps going and going
maanova maanova
15.6 years ago Loren Engrav ★ 1.0k
0
votes
0
replies
1.1k
views
[MAANOVA] Contrasts for interaction levels - possible?
maanova maanova
15.6 years ago boczniak767 ▴ 740
0
votes
3
replies
1.9k
views
[MAANOVA] Warnings in fitmaanova & information request
maanova oligo maanova oligo
15.7 years ago boczniak767 ▴ 740
0
votes
0
replies
1.2k
views
Loop design - biological, technical replication
limma maanova limma maanova
15.7 years ago boczniak767 ▴ 740
0
votes
0
replies
1.5k
views
manova contrast.matrix
maanova maanova
15.9 years ago David ▴ 860
0
votes
0
replies
986
views
To bioinformatics and maanova expert
PROcess maanova PROcess maanova
16.3 years ago Loren Engrav ★ 1.0k
0
votes
0
replies
1.1k
views
Ignore maanova warning messages?
maanova maanova
16.3 years ago Loren Engrav ★ 1.0k
0
votes
3
replies
1.3k
views
Warning serious?
maanova maanova
updated 16.3 years ago by ▴ 130 • written 16.3 years ago by ★ 1.0k
0
votes
0
replies
1.0k
views
What does maanova contrast?
maanova maanova
16.3 years ago Loren Engrav ★ 1.0k
0
votes
2
replies
1.2k
views
Filter before? Filter after? With maanova
Regression probe maanova Regression probe maanova
updated 16.3 years ago by ★ 5.5k • written 16.3 years ago by ★ 1.0k
0
votes
0
replies
991
views
Commands with maanova
Regression maanova Regression maanova
16.3 years ago Loren Engrav ★ 1.0k
0
votes
2
replies
3.2k
views
Random effects and variance components (was: Yet another nested design in limma)
affy limma siggenes factDesign maanova affy limma siggenes factDesign maanova
updated 16.4 years ago by 68k • written 16.4 years ago by ▴ 320
0
votes
2
replies
3.1k
views
Yet another nested design in limma
affy limma siggenes factDesign maanova affy limma siggenes factDesign maanova
updated 16.5 years ago by ▴ 320 • written 16.5 years ago by 53k
0
votes
0
replies
1.3k
views
Yet another nested design in limma
affy limma siggenes factDesign maanova affy limma siggenes factDesign maanova
16.5 years ago Paolo Innocenti ▴ 320
0
votes
1
reply
1.3k
views
No degree of freedom in maanova
maanova maanova
16.7 years ago Marcelo Laia ▴ 450
0
votes
0
replies
1.1k
views
error with get(getOption("device")) in maanova with R 2.8.0
GO maanova GO maanova
17.0 years ago Wolfgang Huber ★ 13k
0
votes
1
reply
1.5k
views
error with get(getOption("device")) in maanova with R 2.8.0
Kidney maanova Kidney maanova
updated 17.0 years ago by ★ 13k • written 17.0 years ago by ▴ 20
0
votes
2
replies
1.3k
views
Does old workspace work?
Regression probe gcrma PROcess maanova Regression probe gcrma PROcess maanova
updated 17.0 years ago by ★ 6.5k • written 17.0 years ago by ★ 1.0k
0
votes
2
replies
1.4k
views
Maanova & createdata
Regression maanova Regression maanova
updated 17.0 years ago by ▴ 450 • written 17.0 years ago by ★ 1.0k
0
votes
0
replies
1.2k
views
F tests of covariates in maanova
maanova maanova
17.2 years ago Kristen K Dang ▴ 50
0
votes
2
replies
1.7k
views
GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 17.2 years ago by ▴ 220 • written 17.2 years ago by ★ 7.2k
0
votes
9
replies
2.2k
views
GO over representation analysis
Annotation GO maanova Annotation GO maanova
updated 17.2 years ago by ★ 7.2k • written 17.2 years ago by ▴ 310
0
votes
1
reply
1.1k
views
How to extract log ratios from two color arrays
GO hgu133a maanova GO hgu133a maanova
17.2 years ago Heike Pospisil ▴ 310
0
votes
0
replies
1.0k
views
Microarray analysis question
Microarray Normalization affy limma convert maanova Microarray Normalization affy limma
17.4 years ago Naomi Altman ★ 6.0k
0
votes
1
reply
1.2k
views
MAANOVA - how to collapse replicate spots
Genetics maanova Genetics maanova
updated 17.5 years ago by ▴ 450 • written 17.5 years ago by ▴ 110
0
votes
0
replies
1.1k
views
[SOLVED] Factorial experiment: No degree of freedom in maanova
maanova maanova
17.7 years ago Marcelo Laia ▴ 450
0
votes
3
replies
1.4k
views
Factorial experiment: No degree of freedom in maanova
maanova maanova
updated 17.7 years ago by ▴ 450 • written 17.7 years ago by ★ 6.0k
0
votes
0
replies
956
views
Factorial experiment: No degree of freedom in maanova
maanova maanova
17.7 years ago Marcelo Laia ▴ 450
0
votes
0
replies
1.0k
views
2 conditions time series with different number of sample at each time point
TimeCourse limma timecourse maanova TimeCourse limma timecourse maanova
17.8 years ago Naomi Altman ★ 6.0k
0
votes
1
reply
1.3k
views
error in maanova matest() with affymetrix
cdf affy maanova affyio cdf affy maanova affyio
updated 18.2 years ago by 68k • written 18.2 years ago by ▴ 510
0
votes
1
reply
1.2k
views
Needed help on maanova fitmaanova function
affy vsn limma maanova affyio affy vsn limma maanova affyio
18.3 years ago Marcelo Laia ▴ 450
0
votes
0
replies
830
views
MAANOVA help
maanova maanova
18.3 years ago Alessandro Fazio ▴ 70
0
votes
1
reply
1.1k
views
Options for spatial normalization?
Normalization maanova Normalization maanova
updated 18.7 years ago by ▴ 80 • written 18.7 years ago by ▴ 30
0
votes
0
replies
1.3k
views
limma vs. maanova for expirement with both contrasts and continuous variables
limma maanova BAC limma maanova BAC
18.8 years ago Gordon Smyth 53k
0
votes
0
replies
973
views
maanova: missing observations in cov/cor
maanova maanova
19.2 years ago Matthew Vaughn ▴ 30
0
votes
4
replies
1.7k
views
valcano plot x-values
maanova maanova
updated 19.6 years ago by 68k • written 19.6 years ago by ▴ 220
1
vote
1
reply
1.9k
views
adjPval and qvalue
qvalue maanova qvalue maanova
updated 19.6 years ago by 68k • written 19.6 years ago by ▴ 220
0
votes
1
reply
1.1k
views
diagnostics
Genetics limma maanova Genetics limma maanova
19.8 years ago alex lam RI ▴ 310
0
votes
0
replies
1.5k
views
affymetrix in maanova, code
qvalue maanova qvalue maanova
19.9 years ago Morten ▴ 300
0
votes
4
replies
1.4k
views
Using MAANOVA functions
Microarray maanova Microarray maanova
updated 19.9 years ago by ▴ 20 • written 19.9 years ago by ▴ 10
0
votes
0
replies
1.3k
views
R/maanova
Microarray affy limma maanova Microarray affy limma maanova
19.9 years ago Gary Churchill ▴ 10
0
votes
3
replies
1.8k
views
Limma vs Maanova, and use of covariates
limma maanova limma maanova
19.9 years ago Ingunn Berget ▴ 150
0
votes
1
reply
1.5k
views
limma(B) and maanova(La.svd) questions
limma maanova limma maanova
20.1 years ago Aurélie Laugraud ▴ 20
0
votes
0
replies
923
views
maanova error
maanova maanova
20.1 years ago Georg Otto ▴ 510
0
votes
0
replies
948
views
limma_design_matrix.
maanova maanova
21.4 years ago Gordon Smyth 53k
55 results • Page 1 of 2
Recent ...
Replies
Answer: Integration: Paired-end vs healthy single-end from a different source by wba64023 • 0
Interesting comparison! The source differences can definitely impact read quality and bias. Curious to see how you handle normalization bet…
Comment: Could we detect difference at pathway level but not significant different at gen by wba64023 • 0
thanks for sharing! [slope 2][1] [1]: https://slope2.online
Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0
The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …
Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0
It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …
Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k
This should now be resolved
Votes
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
Awards • All
Popular Question to Fred Hutch (Recruiting) ▴ 40
Popular Question to shepherl 4.2k
Popular Question to Gordon Smyth 53k
Popular Question to Hervé Pagès 16k
Popular Question to Ou, Jianhong ★ 1.3k
Locations • All
United States, 12 minutes ago
United States, 45 minutes ago
United States, 58 minutes ago
Norway, 1 hour ago
China, 1 hour ago
Traffic: 1935 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6