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Recent ...
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Comment: EuroBioC2023 abstract submission closing soon!
by
Jeremy
•
0
Thanks for the reminder! If you're a Bioconductor user or developer, make sure to [tabs][1] submit your abstract by the deadline, Monday, A…
Comment: Mean variance curve troubleshoot filtering
by
gingergeiger22
•
0
Gordon, thank for your response. 'filterByExpr()' was marginally better. I can see high variability in samples within the groups from the M…
Comment: What is the importance of `--countReadPairs` in featureCounts on paired end data
by
rohitsatyam102
▴
20
Since I don't know which organism you are working on, I would recommend using the following:
`-s 0` if library is unstranded
`-C` Discard…
Comment: What is the importance of `--countReadPairs` in featureCounts on paired end data
by
rohitsatyam102
▴
20
Yes use this option. It is recommended for PE and if you don't use it you will observe nearly twice the number of counts in your results. H…
Comment: Incorporating Salmon offset matrix into Wilcoxon DEG analysis
by
Andre
•
0
I edited the previous post. I meant to remove the estimateGLMRobustDisp line in the second snipper :
````
DGE_list_object <- estimateGLMR…
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