Bioconductor Makeorgpackagefromncbi

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annotationforge makeorgpackagefromncbi

6.8 years ago gabciamm • 0

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AnnotationForge makeOrgPackageFromNCBI gene ontology edgeR pathwayanalysis

updated 12 months ago by L ▴ 50 • written 4.2 years ago by babak.loghmani ▴ 20

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annotation annotationforge annotationdbi makeorgpackagefromncbi

9.3 years ago oliver.tills • 0

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makeorgpackagefromncbi

updated 2.9 years ago by Vincent J. Carey, Jr. 6.7k • written 7.8 years ago by cagenet34 ▴ 20

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AnnotationForge makeOrgPackageFromNCBI

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by mat149 ▴ 70

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MakeOrgPackageFromNCBI NCBI SQL AnnotationForge

updated 4.0 years ago by James W. MacDonald 65k • written 4.0 years ago by chefer • 0

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OrganismDbi makeOrgPackageFromNCBI

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by dissikratzl • 0

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makeOrgPackageFromNCBI

updated 14 months ago by James W. MacDonald 65k • written 14 months ago by irene.artuso • 0

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annotationforge makeOrgPackageFromNCBI

updated 4.2 years ago by James W. MacDonald 65k • written 4.2 years ago by lesneski • 0

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makeorgpackagefromNCBI s.pombe sqliteExecStatement

9.5 years ago Parham • 0

10 results • Page 1 of 1

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Answer: Once again a "Model matrix not full rank" by swbarnes2 ★ 1.3k

Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…

Answer: limma Intercept vs No-intercept models completely changing DMR results? by Gordon Smyth 50k

I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …

Answer: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…

Answer: limma Intercept vs No-intercept models completely changing DMR results? by James W. MacDonald 65k

This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…

Comment: CombineArrays for EPIC and EPIC V2 by Kim • 0

Thank you Tim, this is a great help in getting me started!

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Answer: limma Intercept vs No-intercept models completely changing DMR results?

Answer: CombineArrays for EPIC and EPIC V2

Answer: Too many significant genes when integrating gtex and tcga

Comment: Too many significant genes when integrating gtex and tcga

A: Print Differentially Expressed Exons From Dexseq Results

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