Bioconductor Makeorgpackagefromncbi

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OrganismDbi makeOrgPackageFromNCBI

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by dissikratzl • 0

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AnnotationForge makeOrgPackageFromNCBI

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by mat149 ▴ 70

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makeOrgPackageFromNCBI

updated 13 months ago by James W. MacDonald 65k • written 13 months ago by irene.artuso • 0

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MakeOrgPackageFromNCBI NCBI SQL AnnotationForge

updated 3.9 years ago by James W. MacDonald 65k • written 3.9 years ago by chefer • 0

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AnnotationForge makeOrgPackageFromNCBI gene ontology edgeR pathwayanalysis

updated 12 months ago by L ▴ 50 • written 4.1 years ago by babak.loghmani ▴ 20

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annotationforge makeOrgPackageFromNCBI

updated 4.2 years ago by James W. MacDonald 65k • written 4.2 years ago by lesneski • 0

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annotationforge makeorgpackagefromncbi

6.8 years ago gabciamm • 0

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makeorgpackagefromncbi

updated 2.9 years ago by Vincent J. Carey, Jr. 6.7k • written 7.8 years ago by cagenet34 ▴ 20

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annotation annotationforge annotationdbi makeorgpackagefromncbi

9.2 years ago oliver.tills • 0

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makeorgpackagefromNCBI s.pombe sqliteExecStatement

9.5 years ago Parham • 0

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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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