Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
mds
•
reset
11
votes
15
replies
2.8k
views
edgeR - MDS Plot for Count Data
edger
DEG
mds
plot
6.7 years ago
baus87
• 0
4
votes
3
replies
2.7k
views
Saving MDS scores
MDS
edger
updated 8.4 years ago by
Gordon Smyth
50k • written 9.5 years ago by
tobler
• 0
0
votes
2
replies
1.4k
views
should i include PCs or MDSs as covariates in methylation study?
limma
methylation
R
covariate
MDS
updated 7.0 years ago by
Aaron Lun
★ 28k • written 7.0 years ago by
RC
• 0
2
votes
8
replies
3.8k
views
MDS Plot help in edgeR
edgeR
plotmds
differential gene expression
MDS
mdsplot
updated 5.4 years ago by
Gordon Smyth
50k • written 5.4 years ago by
ilovesuperheroes1993
• 0
2
votes
2
replies
1.0k
views
How to deal with stronger effect by donor than treatment
MDS
RNA-Seq
updated 22 months ago by
Gordon Smyth
50k • written 22 months ago by
Pei
• 0
2
votes
2
replies
1.3k
views
Make samples symbols bigger in PCA / MDS analysis with plotMDS function
plotMDS
PCA
RNASeq
MDS
updated 2.2 years ago by
Gordon Smyth
50k • written 2.2 years ago by
Raito92
▴ 60
1
vote
1
reply
1.6k
views
How to inteprate distances calculated by cmdscale?
differential gene expression
cmdscale
mds
8.1 years ago
Adam
• 0
0
votes
0
replies
1.2k
views
ChAMP MDS 1000 most variable positions
champ
MDS
8.4 years ago
Eric Smith
• 0
8 results • Page
1 of 1
Recent ...
Replies
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Awards
• All
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
Koen Van den Berge
▴ 180
Popular Question
to
shepherl
3.9k
Popular Question
to
Ken C
• 0
Popular Question
to
Johannes Rainer
★ 2.0k
Locations
• All
WEHI, Melbourne, Australia,
14 minutes ago
United States,
1 hour ago
Melbourne, Australia,
1 hour ago
The Netherlands,
1 hour ago
United States,
3 hours ago
Traffic: 540 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6