Bioconductor Covariate

Showing : covariate • reset

vote

replies

1.2k

views

deseq2 DEG covariate study design variables

updated 5.1 years ago by Michael Love 43k • written 5.1 years ago by Yonatan Amzaleg • 0

votes

replies

1.5k

views

DEG deseq2 Covariate

updated 5.9 years ago by Michael Love 43k • written 5.9 years ago by sum732 • 0

votes

replies

1.4k

views

limma covariate

updated 6.0 years ago by Gordon Smyth 52k • written 6.0 years ago by scheran02 • 0

votes

replies

1.8k

views

limma methylation R covariate MDS

updated 8.0 years ago by Aaron Lun ★ 28k • written 8.0 years ago by RC • 0

votes

replies

2.5k

views

limma voom batcheffect covariate

updated 8.0 years ago by Gordon Smyth 52k • written 8.0 years ago by raf4 ▴ 30

votes

replies

4.1k

views

edger contrast covariate glmlrt()

8.0 years ago Jeff Skinner • 0

votes

replies

2.0k

views

limma paired covariate

updated 8.9 years ago by Steve Lianoglou ★ 13k • written 8.9 years ago by meeta.mistry ▴ 30

votes

replies

5.4k

views

RNA rnaseq Covariate adjustment deseq

updated 9.1 years ago by Michael Love 43k • written 9.1 years ago by sjs0282 • 0

votes

replies

2.9k

views

limma pre/post continous covariate

9.3 years ago Smeeta Shrestha ▴ 20

votes

replies

2.8k

views

edger differential expression covariate batch effect glm

updated 9.3 years ago by Gordon Smyth 52k • written 9.3 years ago by aec ▴ 90

votes

replies

3.6k

views

limma covariate block paired samples technical replicates

updated 9.4 years ago by Aaron Lun ★ 28k • written 9.4 years ago by eleonoregravier ▴ 70

votes

replies

6.1k

views

limma spline design and contrast matrix covariate

updated 9.7 years ago by Aaron Lun ★ 28k • written 9.7 years ago by Hilary ▴ 40

votes

replies

5.2k

views

covariate deseqdataset Deseq2 multiple factor design

updated 9.7 years ago by Michael Love 43k • written 9.7 years ago by Lillyhchen ▴ 10

votes

replies

7.1k

views

limma covariate continuous categorical adjustment

updated 9.8 years ago by Gordon Smyth 52k • written 9.8 years ago by sg45653 • 0

votes

replies

5.1k

views

limma reference group covariate

10.3 years ago alakatos ▴ 130

15 results • Page 1 of 1

Recent ...

Replies

Comment: How to perform batch correction on scRNA-seq with confounding plate effects? by 瑞宏 • 0

I would like to share my own understanding: in single-cell RNA sequencing (scRNA-seq), batch correction is solely intended to identify the …

Comment: DiffBind can't find a DAR by Mengjun • 0

Additionally, i checked my bigwig in igv, it shows that the ctrl_1 is more like ko_1, and ctrl_2's track is more like ko_2's track. Did an…

Comment: European Bioconductor Conference 2023 planning by ht • 0

Great news about the European Bioconductor Conference 2023 planning! As someone who enjoys statistical computing and bioinformatics, I'm ex…

Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by njmcdirectportal.com • 0

This is a great post. I like this topic. I found many interesting things from this site. Thanks for posting this again https://www.njmcdire…

Answer: Version conflict when pushing to scQTLtools devel branch by shepherl 4.1k

There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…

Votes

Bioconductor 3.21 is Released!

Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA

Answer: GSVA ssGSEA vs. Broad implementation of ssGSEA

GSVA ssGSEA vs. Broad implementation of ssGSEA

Awards • All