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MeDIP-chip data analysis.
MEDME MEDME
13.6 years ago Jinyan Huang ▴ 50
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Help on ROC analysis
Genetics MEDME ASSIGN Genetics MEDME ASSIGN
14.3 years ago Susan Bosco ▴ 80
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Help on ROC Analysis
Genetics ROC MEDME Genetics ROC MEDME
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 80
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Help on ROC Analysis.
Microarray ROC MEDME Microarray ROC MEDME
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 260
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Help to understand logistic model used in MEDME
Genetics MEDME Genetics MEDME
updated 14.5 years ago by ★ 4.2k • written 14.5 years ago by ▴ 80
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assistance to understand MEDME
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updated 15.0 years ago by ▴ 200 • written 15.0 years ago by ▴ 90
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MEDME for MeDIP on Affymetrix promoter arrays
PROcess MEDME PROcess MEDME
updated 15.1 years ago by ▴ 200 • written 15.1 years ago by ▴ 330
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Request for the assistance to use MEDME
Microarray Normalization Organism probe limma MEDME cycle ASSIGN Microarray Normalization
updated 15.3 years ago by ▴ 30 • written 15.3 years ago by ▴ 90
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FW: Request for the assistance to use MEDME
Normalization Organism probe MEDME cycle ASSIGN Normalization Organism probe MEDME cycle
updated 15.4 years ago by ▴ 30 • written 15.4 years ago by ▴ 90
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Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
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Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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