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XCMS metaMS

updated 5.4 years ago by ron.wehrens ▴ 20 • written 5.4 years ago by julien.kermorvant ▴ 30

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metams

6.2 years ago ryan.high • 0

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metaMS

updated 6.2 years ago by ron.wehrens ▴ 20 • written 6.2 years ago by f.f.vandenberg • 0

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metaMS xcmx CAMERA

updated 9.1 years ago by ron.wehrens ▴ 20 • written 9.1 years ago by lucie.conchou • 0

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metaMS xcms GC-MS metabolomics volatile organic compounds

updated 9.4 years ago by ron.wehrens ▴ 20 • written 9.4 years ago by lucie.conchou • 0

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xcms metaMS MSeasy r

updated 10.1 years ago by peer.karmaus • 0 • written 10.1 years ago by Nemo ▴ 80

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Comment: Using DESeq2 for age prediction by ATpoint ★ 5.0k

You sure will find online tutorials on regression models / machine learning classifiers. The support site is for help with Bioconductor. Ch…

Comment: Using DESeq2 for age prediction by picasa1983 • 0

Thanks ! Do you have any idea how to do that ?

Answer: Using DESeq2 for age prediction by ATpoint ★ 5.0k

The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…

Votes

A: Multi-level experiments in Limma

Answer: Should voomWithQualityWeights still be used when the sample-specific weights var

Answer: DESeq2 for candidate gene analysis

DESeq2 for candidate gene analysis

Answer: DESeq2 for candidate gene analysis

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