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mlinterfaces
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ensemblVEP, variant_effect_predictor versions and release schedule
Cancer
MLInterfaces
bridge
ensemblVEP
AnnotationHub
Cancer
MLInterfaces
bridge
ensemblVEP
11.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
2
replies
1.2k
views
How to best include hyperparameter optimization in MLInterfaces?
MLInterfaces
MLInterfaces
updated 12.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.0 years ago by
Guest User
★ 13k
0
votes
0
replies
1.7k
views
Classification in Mass Spectrometry Data
Microarray
Classification
Cancer
Ovarian
PROcess
MLInterfaces
ASSIGN
Microarray
Cancer
12.4 years ago
McGee, Monnie
▴ 300
0
votes
2
replies
1.5k
views
xvalSpec('NOTEST') problem
MLInterfaces
MLInterfaces
updated 12.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.8 years ago by
Gustavo Fernández Bayón
▴ 440
0
votes
1
reply
1.2k
views
Need help with MLearn in MLInterfaces package
Clustering
MLInterfaces
Clustering
MLInterfaces
updated 16.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.0 years ago by
Tul Gan
▴ 10
0
votes
0
replies
1.4k
views
Bioconductor training course, Boston March 5-6-7 2008
aCGH
SNP
Genetics
Annotation
GO
Visualization
affy
limma
aCGH
MLInterfaces
Category
SNP
17.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
930
views
stat.diag.daB MLInterfaces
Classification
MLInterfaces
Classification
MLInterfaces
18.4 years ago
mpg33@drexel.edu
▴ 90
0
votes
0
replies
1.1k
views
Error in xval: No Direct or Inherited Method for this call
Biobase
MLInterfaces
Biobase
MLInterfaces
18.5 years ago
mpg33@drexel.edu
▴ 90
0
votes
0
replies
1.3k
views
Error in xval: No Direct or Inherited Method for this call
Survival
Biobase
genefilter
MLInterfaces
Survival
Biobase
genefilter
MLInterfaces
18.5 years ago
Martin Morgan
25k
0
votes
3
replies
1.4k
views
xval in MLInterfaces package
MLInterfaces
MLInterfaces
updated 18.8 years ago by
Martin Morgan
25k • written 18.8 years ago by
Wu, Xiwei
▴ 350
0
votes
1
reply
1.2k
views
MLInterfaces
GeneSpring
MLInterfaces
GeneSpring
MLInterfaces
updated 19.1 years ago by
Stephen Henderson
★ 1.0k • written 19.1 years ago by
Qi.Zhang@astrazeneca.com
▴ 60
11 results • Page
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Comment: Annotation package for Manduca sexta
by
GA
▴ 10
Thank you!
Comment: Improving performance of edgeR and limma while adjusting for multiple confounder
by
ATpoint
★ 4.8k
If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…
Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species
by
Mike Smith
★ 6.6k
Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
by
Gordon Smyth
52k
We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
Answer: Merging EPICV1 and V2 betas
by
James W. MacDonald
68k
It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…
Votes
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
A: Is logFC a log2 fold change or some other base in scran::findMarkers
Comment: Error in retrieving clinical data
What is the cheapest day to fly on American Airlines? {Ask_Expert}
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