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mlinterfaces
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ensemblVEP, variant_effect_predictor versions and release schedule
Cancer
MLInterfaces
bridge
ensemblVEP
AnnotationHub
Cancer
MLInterfaces
bridge
ensemblVEP
10.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
2
replies
1000
views
How to best include hyperparameter optimization in MLInterfaces?
MLInterfaces
MLInterfaces
updated 11.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.0 years ago by
Guest User
★ 13k
0
votes
0
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1.5k
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Classification in Mass Spectrometry Data
Microarray
Classification
Cancer
Ovarian
PROcess
MLInterfaces
ASSIGN
Microarray
Cancer
11.4 years ago
McGee, Monnie
▴ 300
0
votes
2
replies
1.2k
views
xvalSpec('NOTEST') problem
MLInterfaces
MLInterfaces
updated 11.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.9 years ago by
Gustavo Fernández Bayón
▴ 440
0
votes
1
reply
1.0k
views
Need help with MLearn in MLInterfaces package
Clustering
MLInterfaces
Clustering
MLInterfaces
updated 15.1 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.1 years ago by
Tul Gan
▴ 10
0
votes
0
replies
1.2k
views
Bioconductor training course, Boston March 5-6-7 2008
aCGH
SNP
Genetics
Annotation
GO
Visualization
affy
limma
aCGH
MLInterfaces
Category
SNP
16.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
763
views
stat.diag.daB MLInterfaces
Classification
MLInterfaces
Classification
MLInterfaces
17.4 years ago
mpg33@drexel.edu
▴ 90
0
votes
0
replies
938
views
Error in xval: No Direct or Inherited Method for this call
Biobase
MLInterfaces
Biobase
MLInterfaces
17.5 years ago
mpg33@drexel.edu
▴ 90
0
votes
0
replies
1.1k
views
Error in xval: No Direct or Inherited Method for this call
Survival
Biobase
genefilter
MLInterfaces
Survival
Biobase
genefilter
MLInterfaces
17.5 years ago
Martin Morgan
25k
0
votes
3
replies
1.1k
views
xval in MLInterfaces package
MLInterfaces
MLInterfaces
updated 17.8 years ago by
Martin Morgan
25k • written 17.8 years ago by
Wu, Xiwei
▴ 350
0
votes
1
reply
1.0k
views
MLInterfaces
GeneSpring
MLInterfaces
GeneSpring
MLInterfaces
updated 18.1 years ago by
Stephen Henderson
★ 1.0k • written 18.1 years ago by
Qi.Zhang@astrazeneca.com
▴ 60
11 results • Page
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Comment: limma models out of memory issue on Slurm HPC
by
Jitendra
▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
Comment: Doing comparison of RNA-seq data using EdgeR
by
Michael Love
41k
Just to clarify, when I originally posted the title and tags had listed "DESeq2" and then the post was changed after my answer was added. …
Comment: fgsea fork
by
shepherl
3.8k
Not quite sure what you mean by clone or fork the package on latest version of R. Bioconductor runs all builds on the latest version of R.…
Answer: Doing comparison of RNA-seq data using EdgeR
by
Gordon Smyth
50k
It's pretty easy to do a two-group comparison using edgeR, but you seem to be stuck at the initial stage of reading data into R. If you exp…
Answer: Differing results from plotMDS and PCAtools
by
Gordon Smyth
50k
The reason why the two plots are different is that the first plot is a PCA plot while the second is a biplot. Quite different plots. The P…
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transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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