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ensemblVEP, variant_effect_predictor versions and release schedule
Cancer MLInterfaces bridge ensemblVEP AnnotationHub Cancer MLInterfaces bridge ensemblVEP
10.6 years ago Valerie Obenchain ★ 6.8k
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How to best include hyperparameter optimization in MLInterfaces?
MLInterfaces MLInterfaces
updated 11.3 years ago by 6.7k • written 11.3 years ago by ★ 13k
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Classification in Mass Spectrometry Data
Microarray Classification Cancer Ovarian PROcess MLInterfaces ASSIGN Microarray Cancer
11.7 years ago McGee, Monnie ▴ 300
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xvalSpec('NOTEST') problem
MLInterfaces MLInterfaces
updated 12.2 years ago by 6.7k • written 12.2 years ago by ▴ 440
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Need help with MLearn in MLInterfaces package
Clustering MLInterfaces Clustering MLInterfaces
updated 15.4 years ago by 6.7k • written 15.4 years ago by ▴ 10
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Bioconductor training course, Boston March 5-6-7 2008
aCGH SNP Genetics Annotation GO Visualization affy limma aCGH MLInterfaces Category SNP
16.5 years ago Vincent J. Carey, Jr. 6.7k
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stat.diag.daB MLInterfaces
Classification MLInterfaces Classification MLInterfaces
17.7 years ago mpg33@drexel.edu ▴ 90
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Error in xval: No Direct or Inherited Method for this call
Biobase MLInterfaces Biobase MLInterfaces
17.8 years ago mpg33@drexel.edu ▴ 90
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Error in xval: No Direct or Inherited Method for this call
Survival Biobase genefilter MLInterfaces Survival Biobase genefilter MLInterfaces
17.8 years ago Martin Morgan 25k
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xval in MLInterfaces package
MLInterfaces MLInterfaces
updated 18.1 years ago by 25k • written 18.1 years ago by ▴ 350
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MLInterfaces
GeneSpring MLInterfaces GeneSpring MLInterfaces
updated 18.4 years ago by ★ 1.0k • written 18.4 years ago by ▴ 60
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Comment: 'path' must be string by James W. MacDonald 66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string by cpierce2 • 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest by Robert • 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta by Guido Hooiveld ★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta by Michael Love 42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
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Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Popular Question to Lluís Revilla Sancho ▴ 730
Popular Question to maltethodberg ▴ 180
Scholar to Michael Love 42k
Popular Question to Leonardo Collado Torres ★ 1.1k
Scholar to Gordon Smyth 51k
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