Showing : modelmatrix • reset
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Paired analysis in proteomics data for DE while interested in only a particular subset of the data
limma modelmatrix pairedanalysis Proteomics
written 7 months ago by ▴ 840
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3
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[How to construct a model.matrix ]
limma modelmatrix
updated 9 months ago by 52k • written 9 months ago by • 0
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982
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Model matrix for a complex study design using aldex.glm module from ALDEx2 R package
ALDEx2 modelmatrix covariates
2.1 years ago amir • 0
2
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4
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1.9k
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DESeq2/edgeR/limma help with most appropriate design matrix
DESeq2 limma modelmatrix edgeR designmatrix
updated 3.8 years ago by 52k • written 3.9 years ago by • 0
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edgeR model matrix with 3 factors and interactions
interactionterm edgeR modelmatrix
4.6 years ago ahsindoomilup • 0
5 results • Page 1 of 1
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Answer: How to analyze Affy data, CEL files not available by gptonline.ai.website • 0
This is a really helpful thread. For anyone looking for more assistance with similar issues, I've found that using ChatGPT at [GPTOnline.ai…
Comment: Are voomByGroup and voomLmFit compatible? by Gordon Smyth 52k
Your question is a bit cryptic, Rich. Are you trying to rewrite the voomByGroup() function yourself, to incorporate functionality that the …
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by Raya • 0
Thank you for pointing this out James, it works now!
Answer: HMP_2019_t2d data origin by Levi Waldron ★ 1.1k
Dear @pleiramalls, @blann, sorry for the delay! We obtained fastq files for the HMP2 study from the HMP data portal (https://portal.hmpda…
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ATpoint ★ 4.9k
I told you why, because you aggregate all cells into a single pseudobulk. You then need a pseudobulk per worm, but that assumes that in the…
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Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
Can NanoString data be analyzed using DESeq2?
Comment: Are voomByGroup and voomLmFit compatible?
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Updated Support Site Editor
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