Showing : modelmatrix • reset
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[How to construct a model.matrix ]
limma modelmatrix
updated 28 days ago by 52k • written 4 weeks ago by • 0
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735
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Model matrix for a complex study design using aldex.glm module from ALDEx2 R package
ALDEx2 modelmatrix covariates
17 months ago amir • 0
2
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4
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DESeq2/edgeR/limma help with most appropriate design matrix
DESeq2 limma modelmatrix edgeR designmatrix
updated 3.1 years ago by 52k • written 3.2 years ago by • 0
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5
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edgeR model matrix with 3 factors and interactions
interactionterm edgeR modelmatrix
3.9 years ago ahsindoomilup • 0
4 results • Page 1 of 1
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Answer: Limma - using both array and spot weights in lmFit by Gordon Smyth 52k
Was answered here: https://support.bioconductor.org/p/17028/
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by daldabrown9 • 0
For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/
Answer: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k
Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…
Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20
Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…
Comment: Help using rtracklayer for gene ID extraction by James W. MacDonald 67k
Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…
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Answer: Fold change calculation in Diffbind vs. DESEQ2?
Fold change calculation in Diffbind vs. DESEQ2?
FeatureCounts Output Counts at Exon Level Using Default Settings, want gene level
Answer: FeatureCounts Output Counts at Exon Level Using Default Settings, want gene leve
Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?
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