Bioconductor Designmatrix

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802

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limma DifferentialExpression Designmatrix

14 months ago Tadeoye ▴ 20

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625

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DESeq2 Designmatrix limma

updated 19 months ago by James W. MacDonald 68k • written 19 months ago by Neha • 0

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1.1k

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subsettingdata edgeR designmatrix

updated 21 months ago by Gordon Smyth 53k • written 21 months ago by prity6459 • 0

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649

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limma designmatrix

updated 22 months ago by Gordon Smyth 53k • written 22 months ago by avery • 0

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1.8k

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DESeq2 designmatrix edgeR limma tidybulk

updated 3.0 years ago by Michael Love 43k • written 3.0 years ago by aditya.m ▴ 10

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1.9k

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R designmatrix edgeR limma model.matrix

3.2 years ago Abdul ▴ 20

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2.1k

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DESeq2 limma modelmatrix edgeR designmatrix

updated 4.3 years ago by Gordon Smyth 53k • written 4.3 years ago by rebecca.lea.johnston • 0

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1.7k

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designmatrix deseq2 DESeq2

updated 4.3 years ago by swbarnes2 ★ 1.4k • written 4.3 years ago by OST • 0

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1.7k

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designmatrix RNA-seq limma

updated 4.8 years ago by Gordon Smyth 53k • written 4.9 years ago by athief ▴ 20

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1.0k

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designmatrix DifferentialExpression edgeR RNAseq

5.0 years ago nageshprabhu.k ▴ 10

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1.6k

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MutlipleFactors DesignMatrix edgeR

5.0 years ago Debayan ▴ 20

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1.6k

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edgeR pairedsamples designmatrix

5.0 years ago sfidemw • 0

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1.3k

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deseq2 miRNASeq designmatrix Batch

updated 5.9 years ago by Michael Love 43k • written 5.9 years ago by anshulmbi • 0

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1.4k

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edger r differentialanalysis rnaseq designmatrix

updated 6.8 years ago by Aaron Lun ★ 29k • written 6.8 years ago by Beginner ▴ 60

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1.8k

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Limma designMatrix

updated 7.6 years ago by Aaron Lun ★ 29k • written 7.6 years ago by Keifa ▴ 10

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1.9k

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limma microarray designmatrix

updated 9.5 years ago by Aaron Lun ★ 29k • written 9.5 years ago by nashchem • 0

16 results • Page 1 of 1

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Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: DiffBind plot.profile error by a2sahaaaq2c • 0

To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k