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msmstests
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msmsTests, inconsistent sign between lFC.Av and LogFC
msmsTests
Proteomics
24 days ago
Ben
• 0
0
votes
8
replies
4.8k
views
Getting data into (and out of) the MSnSet object
proteomics
MSnbase
MSnSet
readMSnSet
msmsTests
updated 6.5 years ago by
sutturka
• 0 • written 8.1 years ago by
moldach
▴ 20
4
votes
5
replies
3.0k
views
How to convert a xlsx data file to MSnSet format?
msnbase
msmstests
proteomics
lc-ms/ms
msnID
updated 7.0 years ago by
Laurent Gatto
1.6k • written 7.0 years ago by
fgol
▴ 10
2
votes
12
replies
2.6k
views
msmsTests, NA values in test.results output
Proteomics
msmstests
FDR
updated 7.4 years ago by
Laurent Gatto
1.6k • written 7.4 years ago by
laural710
• 0
4 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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