Bioconductor Multiplecomparison

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748

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limmaGUI lim MultipleComparison multip

updated 23 months ago by Gordon Smyth 53k • written 23 months ago by roger.moreno.justicia • 0

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1.2k

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Linnorm DEG MultipleComparison

updated 2.3 years ago by shunyip • 0 • written 4.5 years ago by awakumaya • 0

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1.8k

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Proteomics proDA MultipleComparison

2.4 years ago t.b.n.nguyen-9 • 0

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1.7k

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MultipleComparison DESeq2 Genetics contrasts RNASeq

updated 2.5 years ago by James W. MacDonald 68k • written 2.5 years ago by a26fd14e • 0

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1.2k

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DESeq2 MultipleComparison r

updated 3.1 years ago by Michael Love 43k • written 3.1 years ago by ncorak • 0

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870

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MultipleComparison DESeq2

updated 3.7 years ago by Michael Love 43k • written 3.7 years ago by Joshua • 0

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3.4k

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MultipleComparison edgeR DESeq2

written 3.8 years ago by yuet • 0

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1.2k

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factor DESeq2 MultipleComparison

updated 4.2 years ago by swbarnes2 ★ 1.4k • written 4.2 years ago by diegocastano182 • 0

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1.5k

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GeneExpression R limma MultipleComparison

updated 5.1 years ago by James W. MacDonald 68k • written 5.1 years ago by Gwénolé • 0

9 results • Page 1 of 1

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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by ATpoint ★ 5.0k

Yes, still it's not reproducible, yet hard to debug. I cannot reproduce myself either.

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening in a clean install

Votes

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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