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Statistical test
NewWave
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Error in (function (classes, fdef, mtable) : Function 'raster' tag 'logical' cannot find an inheritance method
NewWave
updated 2.2 years ago by 4.3k • written 2.2 years ago by • 0
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error running exp2grn
NewWave
updated 2.4 years ago by ▴ 40 • written 2.5 years ago by • 0
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featureCounts error Assertion failed: (NULL == pairer -> bam_margin_table -> appendix2), function SAM_pairer_finish_margin_table, file input-files.c,…
NewWave
2.4 years ago Kilian • 0
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Adding chromosome numbers to the respective gene ids of DESeq2 output file
NewWave hgu133a2.db
updated 12 weeks ago by • 0 • written 2.4 years ago by • 0
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Spam: 7z password remover tool
mgu74bv2cdf NewWave hgu133a2.db
2.6 years ago roma 0
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Spam: ost to pst migration software
mgu74bv2cdf NewWave hgu133a2.db
2.6 years ago roma 0
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Extracting DEG from topTags
NewWave
updated 2.7 years ago by 53k • written 2.7 years ago by • 0
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How to use txtimport and do differential expression
NewWave
updated 2.7 years ago by 68k • written 2.7 years ago by • 0
9 results • Page 1 of 1
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Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ? by Gordon Smyth 53k
I tend to use dpcCN(), because it more robust than dpc() to experiments with lots of samples and big differences between samples. You coul…
Answer: Which preprocessing steps are needed before running limpa? by Gordon Smyth 53k
Please see the example limpa analyses given at <http://github.com/smythlab/limpa>, especially the kidney cancer case study. limpa does not…
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Korneel • 0
Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…
Comment: Pathway abundance data from Curatedmetagenomics by yesquokkan • 0
Hello, I was also wondering about the same issue. Did you figure it out?
Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0
FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…
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Answer: Subsetting data verses contrasts [DESeq2]?
A: WGCNA differences two groups 10 replicates each group
A: WGCNA sample size minimum: why?
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name
Answer: Can you colour dendrogram branch clusters in pheatmap?
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