Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
nimblegen
•
reset
1
vote
4
replies
5.8k
views
How to process Nimblegen microarray .pair files to get normalized expression matrix
Microarray
Preprocessing
NimbleGen
Normalization
written 2.9 years ago by
Sarah
• 0
0
votes
1
reply
815
views
Extract data from pair files
nimblegen
pair
updated 4.5 years ago by
James W. MacDonald
68k • written 4.5 years ago by
Dhanya
• 0
0
votes
3
replies
1.5k
views
Accessing feature data of a Malus domestica Nimblegen microarray
nimblegen
Biomart
Uniprot
updated 8.9 years ago by
Gordon Smyth
53k • written 8.9 years ago by
theobroma22
▴ 10
3 results • Page
1 of 1
Recent ...
Replies
Comment: Interpretation of output of AffyRNAdeg and hist commands
by
debasainalsa
• 0
When working with AffyRNAdeg output it helps to think of the table like browsing a HEYTEA Menu each row shows a feature of your slides and …
Comment: DESeq2 for candidate gene analysis
by
piffelpaff
▴ 20
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis
by
Michael Love
43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…
Votes
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Join BOC Sciences at Drug Discovery Chemistry
Awards
• All
Popular Question
to
Hervé Pagès
16k
Popular Question
to
jf1
• 0
Popular Question
to
Gordon Smyth
53k
Popular Question
to
dan.gatti
• 0
Popular Question
to
shepherl
4.2k
Locations
• All
Pakistan,
13 minutes ago
The city by the bay,
39 minutes ago
Poland,
45 minutes ago
WEHI, Melbourne, Australia,
55 minutes ago
United States,
2 hours ago
Traffic: 775 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6