Bioconductor Uniprot

Showing : Uniprot • reset

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4.9k

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ID Uniprot EntrezID

2.8 years ago tom.kloter • 0

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6.7k

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clusterProfiler AnnotationHub GO uniprot

updated 13 months ago by Guido Hooiveld ★ 4.1k • written 4.1 years ago by Alberto • 0

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UniProt.ws UniProt

updated 4.3 years ago by James W. MacDonald 68k • written 4.3 years ago by JavierM • 0

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1.3k

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Uniprot Annotation Identifiers

5.9 years ago Juliet Hannah ▴ 360

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1.1k

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drawProteins uniprot

updated 6.1 years ago by James W. MacDonald 68k • written 6.1 years ago by mblango • 0

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uniprot.ws uniprot uniprot accessions

updated 6.3 years ago by James W. MacDonald 68k • written 6.3 years ago by balin • 0

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1.4k

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biomart r getbm uniprot

7.1 years ago lluex.rova • 0

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1.4k

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uniprot.ws uniprot

updated 7.4 years ago by James W. MacDonald 68k • written 7.4 years ago by l.nilse • 0

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2.1k

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Annotation mouse UNIPROT

updated 7.5 years ago by Mike Smith ★ 6.6k • written 7.5 years ago by julie.chevalier • 0

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2.5k

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uniprot.ws UniProt annotation

8.3 years ago l.nilse • 0

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1.4k

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nimblegen Biomart Uniprot

updated 8.3 years ago by Gordon Smyth 52k • written 8.3 years ago by theobroma22 ▴ 10

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2.0k

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uniprot uniprot.ws

9.1 years ago • updated 9.0 years ago Dario Strbenac ★ 1.6k

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3.4k

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uniprot.ws subcellular location uniprot

9.1 years ago DHS • 0

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uniprot.ws uniprot

updated 9.3 years ago by James W. MacDonald 68k • written 9.3 years ago by cerikahp • 0

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1.6k

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uniprot.ws uniprot uniprot accessions software error

updated 9.3 years ago by James W. MacDonald 68k • written 9.3 years ago by john ▴ 10

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4.4k

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biomart uniprot unimart

9.3 years ago john ▴ 10

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4.4k

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uniprot.ws uniprot

updated 10.1 years ago by Marc Carlson ★ 7.2k • written 10.1 years ago by Guido Hooiveld ★ 4.1k

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uniprot.ws uniprot ensembl

updated 10.2 years ago by Marc Carlson ★ 7.2k • written 10.2 years ago by Joseph Barry ▴ 160

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1.8k

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biomaRt uniprot ensembl

updated 10.3 years ago by me • 0 • written 10.3 years ago by António Miguel de Jesus Domingues ▴ 510

19 results • Page 1 of 1

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Comment: DESEQ2 looking at main effects while controlling for a continuous variable by James W. MacDonald 68k

The covariate is accounted for when you fit the model, so you don't need to do anything with it at the contrast step. You don't need a con…

Comment: DESEQ2 looking at main effects while controlling for a continuous variable by Lennie • 0

Thank you so much for taking the time and for the detailed explanation! I was wondering, in your numeric contrast of c(1, -1, 0,0,0), doe…

Answer: DESEQ2 looking at main effects while controlling for a continuous variable by James W. MacDonald 68k

If you use a factor effects model (with an intercept), then you will have a baseline group (the intercept), and all other coefficients exce…

Comment: Issue with DECIPHER::IdTaxa by Daniel • 0

The issue is still there and it is a real pain. ape and ade4 are used by packages like Phyloseq. There should be a way to avoid these inc…

Comment: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with by Gordon Smyth 52k

I generally recommend `block=individual` for unbalanced designs, to recover information from incomplete blocks. I would only be disuaded fr…

Votes

Answer: DESEQ2 looking at main effects while controlling for a continuous variable

Use of clusterProfiler : Error in testForValidKeytype(x, keytype)

Comment: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with

Answer: Using edgeR::voomLmFit for the analysis of paired clinical RNA-seq samples with

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