Bioconductor Normqpcr

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NormqPCR EasyqpcR qPCR HTqPCR limma

updated 4.2 years ago by Ming ▴ 380 • written 5.0 years ago by enricoferrero ▴ 680

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HTqPCR R NormqPCR

6.5 years ago annesha • 0

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normqpcr selecthkgs normalization

7.9 years ago s.m.may • 0

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normqpcr deltaCq qrt-pcr

9.9 years ago jacorvar ▴ 40

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ReadqPCR NormqPCR ReadqPCR NormqPCR

updated 12.9 years ago by James Perkins ▴ 120 • written 12.9 years ago by Guest User ★ 13k

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qPCR NormqPCR qPCR NormqPCR

12.9 years ago James Perkins ▴ 120

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qPCR NormqPCR qPCR NormqPCR

12.9 years ago Guest User ★ 13k

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GO ReadqPCR NormqPCR GO ReadqPCR NormqPCR

updated 13.9 years ago by james perkins ▴ 300 • written 13.9 years ago by Pepijn Kooij ▴ 10

8 results • Page 1 of 1

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Comment: Clarification on counting in Rsubread (featureCounts) by Gordon Smyth 53k

Have you told featureCounts to do strand-specific counting? As pointed out by Frances Turner, you can lose reads if they overlap the gene …

Answer: Clarification on counting in Rsubread (featureCounts) by Frances Turner ▴ 10

You should look at the summary files produced by feature counts. This gives a breakdown of what happened to reads that were not assigned. Y…

Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Votes

Answer: Clarification on counting in Rsubread (featureCounts)

C: RNA-Seq analysis with Limma/edgeR, time course experiment, aberrant results

A: Conversion from counts to FPKM

Answer: Incosistencies in buildSNNGraph() function

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