Showing : opossom • reset
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oposSOM error in UseMethod("layout")
opossom layout error
8.1 years ago kimagure_ ▴ 10
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2
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1.4k
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oposSOM : additional parameters to setup the connexion to biomaRt ?
opossom biomart
updated 9.2 years ago by ▴ 800 • written 9.2 years ago by • 0
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2
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1.5k
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oposSOM C binding function error
oposSOM Bellman-Ford bioconductor
9.5 years ago arrigonialberto86 • 0
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1.2k
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oposSOM error connecting to ensembl
software error biomart oposSOM
updated 9.5 years ago by 25k • written 9.5 years ago by • 0
4 results • Page 1 of 1
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Comment: limma::voom vs edgeR::voomLmFit - when to use? by Gordon Smyth 52k
voomLmFit() is in edgeR instead of limma because it needs to call edgeR::glmFit() internally to determine which of the zero observations al…
Comment: limma::voom vs edgeR::voomLmFit - when to use? by Geoff • 0
Just wondering--why was this function put into `edgeR` rather than `limma`? Maybe a bit technical, but it is a little confusing from an out…
Comment: cannot download atena annotation for human by Davide • 0
Hi Robert, I was able to solve the problem. Indeed, it stems from the co-occurrence of two different AnnotationHub available for hg38. …
Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove by macdonaldfrench7286566 • 0
Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by Kateřina • 0
I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!
Votes
Answer: parameters of filterByExpr
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: GAlignments Cigar to GRanges
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