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opossom
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oposSOM error in UseMethod("layout")
opossom
layout
error
8.1 years ago
kimagure_
▴ 10
0
votes
2
replies
1.4k
views
oposSOM : additional parameters to setup the connexion to biomaRt ?
opossom
biomart
updated 9.2 years ago by
Thomas Maurel
▴ 800 • written 9.2 years ago by
Pierre-François Roux
• 0
0
votes
2
replies
1.5k
views
oposSOM C binding function error
oposSOM
Bellman-Ford
bioconductor
9.5 years ago
arrigonialberto86
• 0
0
votes
0
replies
1.2k
views
oposSOM error connecting to ensembl
software error
biomart
oposSOM
updated 9.5 years ago by
Martin Morgan
25k • written 9.5 years ago by
albert.ayoub
• 0
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Comment: limma::voom vs edgeR::voomLmFit - when to use?
by
Gordon Smyth
52k
voomLmFit() is in edgeR instead of limma because it needs to call edgeR::glmFit() internally to determine which of the zero observations al…
Comment: limma::voom vs edgeR::voomLmFit - when to use?
by
Geoff
• 0
Just wondering--why was this function put into `edgeR` rather than `limma`? Maybe a bit technical, but it is a little confusing from an out…
Comment: cannot download atena annotation for human
by
Davide
• 0
Hi Robert, I was able to solve the problem. Indeed, it stems from the co-occurrence of two different AnnotationHub available for hg38. …
Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove
by
macdonaldfrench7286566
• 0
Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an
by
Kateřina
• 0
I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!
Votes
Answer: parameters of filterByExpr
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: GAlignments Cigar to GRanges
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