Bioconductor Opossom

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opossom layout error

6.6 years ago kimagure_ ▴ 10

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opossom biomart

updated 7.7 years ago by Thomas Maurel ▴ 800 • written 7.7 years ago by Pierre-François Roux • 0

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oposSOM Bellman-Ford bioconductor

8.0 years ago arrigonialberto86 • 0

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software error biomart oposSOM

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by albert.ayoub • 0

4 results • Page 1 of 1

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Answer: WGCNA documentation not available by James W. MacDonald 64k

Although people sometimes ask questions about WGCNA on this support site, it's not a Bioconductor package and therefore off-topic. Peter La…

Comment: ATACseqQC shiftGAlignmentsList() problem by Ou, Jianhong ★ 1.3k

try: `gal1 <- shiftGAlignmentsList(gal, outbam='3-AL1_Tn5_shift.bam')`. I will try to figure out why the memory is so high.

Comment: ATACseqQC shiftGAlignmentsList() problem by jfmay • 0

Thanks for your response. The version of ATACseqQC I'm using is 1.26.0. I tried to set bigFile=TRUE. The resulting object *gal1* still ends…

Answer: biomaRt_getBM_Failed to collect lazy table by James W. MacDonald 64k

That's an old bug that you should be able to fix by updating. I can't remember what package, although `db_collect` comes from `dbplyr` (and…

Comment: rDGIdb package inconsistency with web interface by christopherjamessteel1990 • 0

I went on https://www.dgidb.org/api and searched "RPS3A" and got the below result. Not sure how you got something different. There is certa…

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Answer: ScRNAseq analysis scran :: quickcluster Error

Comment: Ensembl down???

Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and

Comment: Ensembl down???

Answer: SingleR annotation of several slots/patients

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