Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
picksoftthreshold
•
reset
0
votes
0
replies
865
views
Drop of soft-threshold curve with high power values
wgcna
picksoftthreshold
scale-free topology
co-expression network
6.0 years ago
marcantoine.guery
• 0
2
votes
0
replies
1.9k
views
'Error in summary(lm1)$coefficients[2, 1] : subscript out of bounds' while running pickSoftThreshold in WGCNA
wgcna
picksoftthreshold
6.1 years ago
aditi
▴ 20
1
vote
1
reply
1.8k
views
WGCNA - Choosing the best threshold
wgcna
sft
picksoftthreshold
threshold
rnaseq
updated 6.3 years ago by
Peter Langfelder
★ 3.0k • written 6.3 years ago by
Fabricio Almeida-Silva
▴ 40
0
votes
3
replies
1.7k
views
Unable to get soft threshold power using WGCNA for RNA-seq data
rnaseq
wgcna
picksoftthreshold
updated 7.6 years ago by
Lluís Revilla Sancho
▴ 730 • written 7.6 years ago by
divara01
• 0
0
votes
2
replies
4.1k
views
WGCNA - problems picking a suitable power
WGCNA
pickSoftThreshold
power
RNA-Seq
updated 8.2 years ago by
Peter Langfelder
★ 3.0k • written 8.2 years ago by
mrodrigues.fernanda
▴ 10
5 results • Page
1 of 1
Recent ...
Replies
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Comment: Too many significant genes when integrating gtex and tcga
by
Michael Love
41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
• 0
Popular Question
to
Theo
▴ 10
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Locations
• All
France,
2 minutes ago
WEHI, Melbourne, Australia,
5 minutes ago
San Diego,
40 minutes ago
United Kingdom,
1 hour ago
United States,
2 hours ago
Traffic: 544 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6