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ATpoint
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written 9 months ago by
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Comment: DEseq2 replicate normalization
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michael.morash
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Yes, thank you. This has helped me a great deal. I was having a hard time wrapping my head around what the different designs were telling D…
Answer: Error with hclust
by
ATpoint
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860
The proper getter function to get expression data from the ExpressionSet class is `exprs()` which gives probes as rows and samples as comlu…
Comment: deseq2 datasetfrommatrix
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ATpoint
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Cross-posted: https://www.biostars.org/p/9500079/
Answer: deseq2 datasetfrommatrix
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James W. MacDonald
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Yes. You are meant to be providing counts and some are negative. Since you can't count things and get negative numbers, there is a problem…
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