Biostar PlotGrouper

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plotGrouper DESeq2 plot

updated 15 months ago by ATpoint ★ 1.2k • written 15 months ago by Sowbhagyalakshmi • 0

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Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array by Yang Shi • 0

Thanks sir! I got it now!

Comment: Reading multiple data segments from FCS 3.0 file by SamGG ▴ 270

You should better start a question, but here is some clues. While this operation is refered as concatenate you can find it as coerce in flo…

Answer: how to make a group to apply the data to CAMERA by Gordon Smyth 45k

See the [limma User's Guide](https://www.bioconductor.org/packages/3.15/bioc/vignettes/limma/inst/doc/usersguide.pdf) for how to undertake …

Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array by Guido Hooiveld ★ 3.2k

To add to the extensive discussion above, you may also want to have a look at the so-called UPC algorithm, available in the [package][1] `S…

Answer: How to best visualize multi-level transcriptomics experiment data? by Gordon Smyth 45k

> One way is to extract the differentially expressed genes with p.val = 0.05 and logFC = +/-1.0 I strongly recommend using FDR < 0.05 and…

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A: coefficient not estimable (limma warning)

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Scholar to SamGG ▴ 270

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