Showing : polyester • reset
0
votes
1
reply
682
views
polyester biases
polyester
updated 2.4 years ago by 43k • written 2.4 years ago by ▴ 10
0
votes
0
replies
718
views
polyester running question
polyester
2.9 years ago Seongwoo Han ▴ 10
0
votes
0
replies
784
views
Range value of the dispersion parameters (a1, alpha 0 and sigmad)
polyester dispersion
updated 4.5 years ago by 43k • written 4.5 years ago by • 0
0
votes
1
reply
949
views
Error message
polyester
updated 4.6 years ago by 4.2k • written 4.6 years ago by • 0
0
votes
2
replies
2.4k
views
RNA-seq read simulation for benchmarking differential expression/splicing variance
polyester simulation RNA-seq syntheticdata
updated 4.9 years ago by 53k • written 4.9 years ago by ▴ 70
0
votes
0
replies
891
views
Polyester - simulate_experiment_countmat with gtf
polyester
5.5 years ago liorglic ▴ 10
1
vote
0
replies
919
views
Polyester's simulate_experiment man pages / vignette description
polyester
6.0 years ago Michael Love 43k
0
votes
0
replies
1.3k
views
Could an experienced user of Polyester help me with some questions?
rna-seq polyester simulation time course
7.8 years ago fa.gholizadeh89 • 0
0
votes
2
replies
2.0k
views
How to simulate a count matrix using Polyester
simulation count matrix RNA-seq Polyester
updated 7.8 years ago by ▴ 210 • written 7.8 years ago by • 0
0
votes
0
replies
1.4k
views
Polyester - creating simulated reads based on raw count matrix
polyester rnaseq simulation
8.2 years ago sseo2 • 0
2
votes
1
reply
1.9k
views
polyester: adding noise to RNASeq counts?
rnaseq polyester
updated 9.3 years ago by ▴ 210 • written 9.3 years ago by • 0
0
votes
7
replies
2.4k
views
Using Polyester to simulate large number of reads from a large transcriptome
polyester rnaseq
updated 9.4 years ago by ▴ 10 • written 9.4 years ago by • 0
12 results • Page 1 of 1
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Awards • All
Popular Question to Travis • 0
Popular Question to James W. MacDonald 68k
Popular Question to Gordon Smyth 53k
Popular Question to shepherl 4.2k
Popular Question to Joseph • 0
Locations • All
United States, 53 minutes ago
Denmark, 3 hours ago
The city by the bay, 5 hours ago
Seattle, WA, United States, 5 hours ago
United States, 6 hours ago
Traffic: 652 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6