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promise
•
reset
0
votes
0
replies
1.1k
views
Biocore response to Affymetrix data format changes
Microarray
GO
Network
Cancer
cdf
affy
PROMISE
Microarray
GO
Network
Cancer
cdf
affy
20.8 years ago
Kulp, David
▴ 20
0
votes
0
replies
1.0k
views
gcrma problem caused by using updated new CDF and probesequence?
Normalization
hgu133a
hgu95a
cdf
probe
affy
gcrma
PROMISE
Normalization
hgu133a
hgu95a
16.6 years ago
Yan Zhang
▴ 130
0
votes
0
replies
677
views
Looking for extra Income? Please Read.
PROMISE
PROMISE
16.8 years ago
hardware.inc505@gmail.com
▴ 10
0
votes
0
replies
715
views
!SPAM: Christmas gifft idea!
PROMISE
PROMISE
15.4 years ago
Earnhardt Tako
▴ 10
0
votes
2
replies
1.3k
views
Error, while using produceGEOSampleInfoTemplate
beadarray
lumi
PROMISE
beadarray
lumi
PROMISE
updated 11.6 years ago by
Tim Triche
★ 4.2k • written 11.6 years ago by
Aliaksei Holik
▴ 350
0
votes
2
replies
1.3k
views
Generating GEO submission files from beadarray summary data
beadarray
lumi
PROMISE
beadarray
lumi
PROMISE
updated 11.6 years ago by
Mark Dunning
★ 1.1k • written 11.6 years ago by
Tim Triche
★ 4.2k
0
votes
1
reply
1.2k
views
getting an error with ggbio
PROMISE
PROMISE
11.3 years ago
Abhishek Pratap
▴ 410
0
votes
2
replies
1.8k
views
subsetting SummarizedExperiments - a proposal (or a hack?)
Cancer
IRanges
GenomicRanges
PROMISE
Cancer
IRanges
GenomicRanges
PROMISE
updated 10.2 years ago by
Steve Lianoglou
★ 13k • written 10.2 years ago by
Malcolm Cook
★ 1.6k
0
votes
1
reply
1.4k
views
error on heatmap
PROMISE
metagenomeSeq
PROMISE
metagenomeSeq
updated 10.2 years ago by
Joseph Nathaniel Paulson
▴ 280 • written 10.2 years ago by
Guest User
★ 13k
9 results • Page
1 of 1
Recent ...
Replies
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Comment: Too many significant genes when integrating gtex and tcga
by
Michael Love
41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Answer: Too many significant genes when integrating gtex and tcga
by
James W. MacDonald
65k
See `?results`, in particular the lfcThreshold argument.
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Votes
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
stuck on unimplemented type 'list' in 'EncodeElement'
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