Bioconductor Quantsmooth

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quantsmooth

updated 10.1 years ago by Jan Oosting ▴ 20 • written 10.1 years ago by bob.stephens.2005 • 0

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quantsmooth quantsmooth

13.1 years ago Srinivas Srikanth ▴ 70

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ideogram quantsmooth GenomeGraphs ideogram quantsmooth GenomeGraphs

13.3 years ago Pete Shepard ▴ 240

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1.4k

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Clustering annotate quantsmooth Clustering annotate quantsmooth

updated 13.6 years ago by Oosting, J. PATH ▴ 550 • written 13.6 years ago by Nandini B ▴ 30

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1.5k

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geneplotter affy affyio beadarray quantsmooth beadarraySNP geneplotter affy affyio

updated 17.1 years ago by Matt Ritchie ▴ 460 • written 17.1 years ago by Elizabeth McClellan ▴ 10

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1.1k

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Biobase annotate affy affyio beadarray quantsmooth beadarraySNP lumi Biobase annotate

17.3 years ago Johnstone, Alice ▴ 410

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1.3k

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geneplotter affy affyio beadarray quantsmooth beadarraySNP geneplotter affy affyio

updated 17.3 years ago by Mark Dunning ▴ 320 • written 17.3 years ago by Krys Kelly ▴ 270

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1.5k

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geneplotter affy affyio beadarray quantsmooth beadarraySNP geneplotter affy affyio

updated 17.3 years ago by Mark Dunning ▴ 320 • written 17.3 years ago by Johnstone, Alice ▴ 410

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1.7k

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geneplotter affy affyio beadarray quantsmooth beadarraySNP geneplotter affy affyio

updated 17.3 years ago by Mike Smith ▴ 40 • written 17.3 years ago by Krys Kelly ▴ 270

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1.3k

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Microarray Annotation geneplotter affy affyio beadarray quantsmooth beadarraySNP affy

updated 17.4 years ago by Matt Ritchie ▴ 460 • written 17.4 years ago by Keith James ▴ 10

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Comment: Handling Epic Array Data by Melisa Tecik • 0

Thank you so much for the clarification. As you said the replicates are the cells from different plates. For instance, both R01C01 and R05C…

Answer: Handling Epic Array Data by James W. MacDonald 67k

You don't need a sample sheet. It is just a simple way to identify the Idat files and possibly include sample information. But you appear t…

Comment: preprocessIllumina error with EPICv2 array by Rakesh • 0

Amazing, thanks for the help!

Answer: Allele frequencies for ALL alleles of one SNP ? by Robert Castelo ★ 3.4k

Hi, the [GenomicScores](https://bioconductor.org/packages/GenomicSCores) package provides supporting infrastructure to create annotation re…

Answer: preprocessIllumina error with EPICv2 array by James W. MacDonald 67k

You shouldn't need to change the annotation, and certainly not like that. You should never need to use the `@` function directly - there ar…

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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela

Answer: preprocessIllumina error with EPICv2 array

Answer: UniProt.ws query loading indefinitely

Answer: Package needs internet access

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